RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ATRNO75882 1429 aa9.08□□□□□ -0.96
SMG1-201ENST00000330588 SLIT2O94813 1529 aa9.08□□□□□ -0.96
SMG1-201ENST00000330588 QRICH2Q9H0J4 1663 aa9.08□□□□□ -0.96
SMG1-201ENST00000330588 PRR36Q9H6K5 1346 aa9.08□□□□□ -0.96
SMG1-201ENST00000330588 SBNO2Q9Y2G9 1366 aa9.08□□□□□ -0.96
SMG1-201ENST00000330588 CRYBG1Q9Y4K1 1723 aa9.08□□□□□ -0.96
SMG1-201ENST00000330588 MINK1Q8N4C8 1332 aaPredicted RBP9.08□□□□□ -0.96
SMG1-201ENST00000330588 CENPJQ9HC77 1338 aaPredicted RBP9.08□□□□□ -0.96
SMG1-201ENST00000330588 RXRBP28702 533 aa9.07□□□□□ -0.96
SMG1-201ENST00000330588 APLP1P51693 650 aa9.07□□□□□ -0.96
SMG1-201ENST00000330588 EYA1Q99502 592 aa9.07□□□□□ -0.96
SMG1-201ENST00000330588 PLEKHG3A1L390 1219 aa9.07□□□□□ -0.96
SMG1-201ENST00000330588 RBM6P78332 1123 aaKnown RBP9.07□□□□□ -0.96
SMG1-201ENST00000330588 SAFB2Q14151 953 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMG1-201ENST00000330588 C8orf37Q96NL8 207 aa9.07□□□□□ -0.96
SMG1-201ENST00000330588 BCL9LQ86UU0 1499 aa9.06□□□□□ -0.96
SMG1-201ENST00000330588 RALGAPBQ86X10 1494 aa9.06□□□□□ -0.96
SMG1-201ENST00000330588 NUTM2FA1L443 756 aa9.06□□□□□ -0.96
SMG1-201ENST00000330588 MLLT3P42568 568 aaPredicted RBP9.06□□□□□ -0.96
SMG1-201ENST00000330588 NBPF1Q3BBV0 1214 aa9.06□□□□□ -0.96
SMG1-201ENST00000330588 NGLY1Q96IV0 654 aa9.06□□□□□ -0.96
SMG1-201ENST00000330588 TRPC5Q9UL62 973 aaPredicted RBP9.06□□□□□ -0.96
SMG1-201ENST00000330588 CLSPNQ9HAW4 1339 aa9.05□□□□□ -0.96
SMG1-201ENST00000330588 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
SMG1-201ENST00000330588 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
SMG1-201ENST00000330588 NUDT16Q96DE0 195 aaKnown RBP9.05□□□□□ -0.96
SMG1-201ENST00000330588 HIRIP3Q9BW71 556 aaPredicted RBP9.05□□□□□ -0.96
SMG1-201ENST00000330588 QTRT2Q9H974 415 aaKnown RBP9.05□□□□□ -0.96
SMG1-201ENST00000330588 PLCH1Q4KWH8 1693 aa9.05□□□□□ -0.96
SMG1-201ENST00000330588 ROCK2O75116 1388 aaKnown RBP9.05□□□□□ -0.96
SMG1-201ENST00000330588 ZNF516Q92618 1163 aa9.04□□□□□ -0.96
SMG1-201ENST00000330588 SIN3AQ96ST3 1273 aa9.04□□□□□ -0.96
SMG1-201ENST00000330588 CDK19Q9BWU1 502 aa9.04□□□□□ -0.96
SMG1-201ENST00000330588 USP21Q9UK80 565 aa9.04□□□□□ -0.96
SMG1-201ENST00000330588 COL14A1Q05707 1796 aaKnown RBP9.04□□□□□ -0.96
SMG1-201ENST00000330588 RGS12O14924 1447 aa9.04□□□□□ -0.96
SMG1-201ENST00000330588 ADAMTS2O95450 1211 aa9.03□□□□□ -0.96
SMG1-201ENST00000330588 XPCQ01831 940 aaPredicted RBP9.03□□□□□ -0.96
SMG1-201ENST00000330588 SLF2Q8IX21 1173 aa9.03□□□□□ -0.96
SMG1-201ENST00000330588 TONSLQ96HA7 1378 aa9.03□□□□□ -0.96
SMG1-201ENST00000330588 EVC2Q86UK5 1308 aa9.03□□□□□ -0.96
SMG1-201ENST00000330588 NGDNQ8NEJ9 315 aaKnown RBP9.03□□□□□ -0.96
SMG1-201ENST00000330588 PMFBP1Q8TBY8 1022 aa9.03□□□□□ -0.96
SMG1-201ENST00000330588 NRAPQ86VF7 1730 aa9.02□□□□□ -0.97
SMG1-201ENST00000330588 PHRF1Q9P1Y6 1649 aaKnown RBP9.02□□□□□ -0.97
SMG1-201ENST00000330588 PTGDRQ13258 359 aa9.02□□□□□ -0.97
SMG1-201ENST00000330588 PPP1R18Q6NYC8 613 aa9.02□□□□□ -0.97
SMG1-201ENST00000330588 UNC5CLQ8IV45 518 aa9.02□□□□□ -0.97
SMG1-201ENST00000330588 PUS7Q96PZ0 661 aaKnown RBP9.02□□□□□ -0.97
SMG1-201ENST00000330588 TIMELESSQ9UNS1 1208 aa9.02□□□□□ -0.97
SMG1-201ENST00000330588 ATAD2Q6PL18 1390 aa9.02□□□□□ -0.97
SMG1-201ENST00000330588 PPIP5K1Q6PFW1 1433 aa9.01□□□□□ -0.97
SMG1-201ENST00000330588 RNF40O75150 1001 aa9.01□□□□□ -0.97
SMG1-201ENST00000330588 NEUROD1Q13562 356 aa9.01□□□□□ -0.97
SMG1-201ENST00000330588 LAPTM4AQ15012 233 aa9.01□□□□□ -0.97
SMG1-201ENST00000330588 ACEP12821 1306 aa9□□□□□ -0.97
SMG1-201ENST00000330588 GLI3P10071 1580 aa9□□□□□ -0.97
SMG1-201ENST00000330588 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
SMG1-201ENST00000330588 VPS72Q15906 364 aa9□□□□□ -0.97
SMG1-201ENST00000330588 NBPF8Q3BBV2 869 aa9□□□□□ -0.97
SMG1-201ENST00000330588 GJD4Q96KN9 370 aaPredicted RBP9□□□□□ -0.97
SMG1-201ENST00000330588 AKAP12Q02952 1782 aa9□□□□□ -0.97
SMG1-201ENST00000330588 USP19O94966 1318 aa9□□□□□ -0.97
SMG1-201ENST00000330588 USP6P35125 1406 aa9□□□□□ -0.97
SMG1-201ENST00000330588 SSH2Q76I76 1423 aa9□□□□□ -0.97
SMG1-201ENST00000330588 SRPK2P78362 688 aaKnown RBP8.99□□□□□ -0.97
SMG1-201ENST00000330588 Q6ZNB5 142 aa8.99□□□□□ -0.97
SMG1-201ENST00000330588 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.99□□□□□ -0.97
SMG1-201ENST00000330588 V9GY48 417 aaPredicted RBP8.99□□□□□ -0.97
SMG1-201ENST00000330588 CPDO75976 1380 aa8.99□□□□□ -0.97
SMG1-201ENST00000330588 NRKQ7Z2Y5 1582 aa8.99□□□□□ -0.97
SMG1-201ENST00000330588 USP54Q70EL1 1684 aa8.99□□□□□ -0.97
SMG1-201ENST00000330588 SLIT3O75094 1523 aa8.99□□□□□ -0.97
SMG1-201ENST00000330588 NKX2-3Q8TAU0 364 aa8.99□□□□□ -0.97
SMG1-201ENST00000330588 PRKD2Q9BZL6 878 aa8.99□□□□□ -0.97
SMG1-201ENST00000330588 CPSF1Q10570 1443 aaKnown RBP8.98□□□□□ -0.97
SMG1-201ENST00000330588 ABCC6O95255 1503 aa8.98□□□□□ -0.97
SMG1-201ENST00000330588 NINLQ9Y2I6 1382 aa8.98□□□□□ -0.97
SMG1-201ENST00000330588 LMO7Q8WWI1 1683 aa8.97□□□□□ -0.97
SMG1-201ENST00000330588 LCE2BO14633 110 aa8.97□□□□□ -0.97
SMG1-201ENST00000330588 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
SMG1-201ENST00000330588 NLRP13Q86W25 1043 aa8.97□□□□□ -0.97
SMG1-201ENST00000330588 CCDC125Q86Z20 511 aa8.97□□□□□ -0.97
SMG1-201ENST00000330588 CARD11Q9BXL7 1154 aa8.97□□□□□ -0.97
SMG1-201ENST00000330588 ADGRG1Q9Y653 693 aa8.97□□□□□ -0.97
SMG1-201ENST00000330588 MON2Q7Z3U7 1717 aa8.97□□□□□ -0.97
SMG1-201ENST00000330588 TTC21AQ8NDW8 1320 aa8.97□□□□□ -0.97
SMG1-201ENST00000330588 FAM83GA6ND36 823 aa8.96□□□□□ -0.97
SMG1-201ENST00000330588 CABLES1Q8TDN4 633 aa8.96□□□□□ -0.97
SMG1-201ENST00000330588 THSD7AQ9UPZ6 1657 aa8.96□□□□□ -0.98
SMG1-201ENST00000330588 PIK3C2AO00443 1686 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 GFRA3O60609 400 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 DNAJB2P25686 324 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 SLC4A3P48751 1232 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 TPRNQ4KMQ1 711 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 PRR14Q9BWN1 585 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 TMEM134Q9H6X4 195 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 ZPR1O75312 459 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 COPS2P61201 443 aa8.95□□□□□ -0.98
SMG1-201ENST00000330588 RBM46Q8TBY0 533 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms