RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 AATKQ6ZMQ8 1374 aa15.67■□□□□ 0.1
HMGCS1-201ENST00000325110 DNTTIP2Q5QJE6 756 aaKnown RBP15.67■□□□□ 0.1
HMGCS1-201ENST00000325110 PALD1Q9ULE6 856 aa15.67■□□□□ 0.1
HMGCS1-201ENST00000325110 TSPOAP1O95153 1857 aa15.67■□□□□ 0.1
HMGCS1-201ENST00000325110 GNAT3A8MTJ3 354 aa15.67■□□□□ 0.1
HMGCS1-201ENST00000325110 LTKP29376 864 aa15.67■□□□□ 0.1
HMGCS1-201ENST00000325110 AK9Q5TCS8 1911 aa15.67■□□□□ 0.1
HMGCS1-201ENST00000325110 SRGAP3O43295 1099 aa15.67■□□□□ 0.1
HMGCS1-201ENST00000325110 PHAXQ9H814 394 aaKnown RBP15.66■□□□□ 0.1
HMGCS1-201ENST00000325110 ESYT1Q9BSJ8 1104 aa15.66■□□□□ 0.1
HMGCS1-201ENST00000325110 LMBRD1Q9NUN5 540 aa15.66■□□□□ 0.1
HMGCS1-201ENST00000325110 CPSF1Q10570 1443 aaKnown RBP15.66■□□□□ 0.1
HMGCS1-201ENST00000325110 PREX1Q8TCU6 1659 aa15.66■□□□□ 0.1
HMGCS1-201ENST00000325110 NCOA3Q9Y6Q9 1424 aa15.65■□□□□ 0.1
HMGCS1-201ENST00000325110 RBSNQ9H1K0 784 aa15.65■□□□□ 0.1
HMGCS1-201ENST00000325110 TEFQ10587 303 aa15.65■□□□□ 0.1
HMGCS1-201ENST00000325110 R3HCC1Q9Y3T6 440 aaKnown RBP15.65■□□□□ 0.1
HMGCS1-201ENST00000325110 TNRQ92752 1358 aa15.65■□□□□ 0.1
HMGCS1-201ENST00000325110 CWC27Q6UX04 472 aaKnown RBP15.64■□□□□ 0.09
HMGCS1-201ENST00000325110 UNC5CLQ8IV45 518 aa15.64■□□□□ 0.09
HMGCS1-201ENST00000325110 GLIPR1L2Q4G1C9 344 aa15.64■□□□□ 0.09
HMGCS1-201ENST00000325110 CHMP3Q9Y3E7 222 aa15.64■□□□□ 0.09
HMGCS1-201ENST00000325110 ZSCAN30Q86W11 494 aa15.63■□□□□ 0.09
HMGCS1-201ENST00000325110 XPCQ01831 940 aaPredicted RBP15.63■□□□□ 0.09
HMGCS1-201ENST00000325110 PPP1R42Q7Z4L9 355 aa15.63■□□□□ 0.09
HMGCS1-201ENST00000325110 SRCIN1Q9C0H9 1055 aa15.63■□□□□ 0.09
HMGCS1-201ENST00000325110 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
HMGCS1-201ENST00000325110 ATP10DQ9P241 1426 aa15.63■□□□□ 0.09
HMGCS1-201ENST00000325110 NSFL1CQ9UNZ2 370 aaKnown RBP15.63■□□□□ 0.09
HMGCS1-201ENST00000325110 RBM10P98175 930 aaKnown RBP15.62■□□□□ 0.09
HMGCS1-201ENST00000325110 PPP6R1Q9UPN7 881 aa15.62■□□□□ 0.09
HMGCS1-201ENST00000325110 AIMP1Q12904 312 aaKnown RBP15.62■□□□□ 0.09
HMGCS1-201ENST00000325110 GPT2Q8TD30 523 aa15.62■□□□□ 0.09
HMGCS1-201ENST00000325110 DIAPH3Q9NSV4 1193 aa15.62■□□□□ 0.09
HMGCS1-201ENST00000325110 C9orf78Q9NZ63 289 aaPredicted RBP15.62■□□□□ 0.09
HMGCS1-201ENST00000325110 FIBPO43427 364 aa15.61■□□□□ 0.09
HMGCS1-201ENST00000325110 CHMLP26374 656 aa15.61■□□□□ 0.09
HMGCS1-201ENST00000325110 TAF7Q15545 349 aaPredicted RBP15.61■□□□□ 0.09
HMGCS1-201ENST00000325110 TMEM63CQ9P1W3 806 aa15.61■□□□□ 0.09
HMGCS1-201ENST00000325110 CCDC9Q9Y3X0 531 aaKnown RBP15.61■□□□□ 0.09
HMGCS1-201ENST00000325110 CPA1P15085 419 aa15.61■□□□□ 0.09
HMGCS1-201ENST00000325110 ATP8B2P98198 1209 aa15.6■□□□□ 0.09
HMGCS1-201ENST00000325110 FLT4P35916 1363 aa15.6■□□□□ 0.09
HMGCS1-201ENST00000325110 KIAA0232Q92628 1395 aa15.6■□□□□ 0.09
HMGCS1-201ENST00000325110 PI4KAP2A4QPH2 592 aa15.6■□□□□ 0.09
HMGCS1-201ENST00000325110 PI4KAP1Q8N8J0 262 aa15.6■□□□□ 0.09
HMGCS1-201ENST00000325110 SYAP1Q96A49 352 aaPredicted RBP15.6■□□□□ 0.09
HMGCS1-201ENST00000325110 FAM13BQ9NYF5 915 aa15.6■□□□□ 0.09
HMGCS1-201ENST00000325110 KIF20BQ96Q89 1820 aa15.59■□□□□ 0.09
HMGCS1-201ENST00000325110 VPS37CA5D8V6 355 aaPredicted RBP15.59■□□□□ 0.09
HMGCS1-201ENST00000325110 VSIG10Q8N0Z9 540 aa15.59■□□□□ 0.09
HMGCS1-201ENST00000325110 ZDHHC9Q9Y397 364 aa15.59■□□□□ 0.09
HMGCS1-201ENST00000325110 MPRIPQ6WCQ1 1025 aa15.59■□□□□ 0.09
HMGCS1-201ENST00000325110 IL17REQ8NFR9 667 aa15.59■□□□□ 0.09
HMGCS1-201ENST00000325110 KIF24Q5T7B8 1368 aa15.58■□□□□ 0.09
HMGCS1-201ENST00000325110 PLEKHG3A1L390 1219 aa15.58■□□□□ 0.08
HMGCS1-201ENST00000325110 MBD3O95983 291 aa15.58■□□□□ 0.08
HMGCS1-201ENST00000325110 MCM2P49736 904 aa15.58■□□□□ 0.08
HMGCS1-201ENST00000325110 CHPF2Q9P2E5 772 aa15.58■□□□□ 0.08
HMGCS1-201ENST00000325110 SMC3Q9UQE7 1217 aa15.58■□□□□ 0.08
HMGCS1-201ENST00000325110 TMEM2Q9UHN6 1383 aa15.58■□□□□ 0.08
HMGCS1-201ENST00000325110 USP44Q9H0E7 712 aa15.57■□□□□ 0.08
HMGCS1-201ENST00000325110 NBPF7P0C2Y1 421 aaPredicted RBP15.57■□□□□ 0.08
HMGCS1-201ENST00000325110 RHPN1Q8TCX5 695 aa15.57■□□□□ 0.08
HMGCS1-201ENST00000325110 SIL1Q9H173 461 aa15.57■□□□□ 0.08
HMGCS1-201ENST00000325110 IFIT2P09913 472 aaKnown RBP15.57■□□□□ 0.08
HMGCS1-201ENST00000325110 ZNF530Q6P9A1 599 aaPredicted RBP15.57■□□□□ 0.08
HMGCS1-201ENST00000325110 CNTROBQ8N137 903 aa15.57■□□□□ 0.08
HMGCS1-201ENST00000325110 PSME1Q06323 249 aa15.56■□□□□ 0.08
HMGCS1-201ENST00000325110 TSPY26PQ9H489 355 aa15.56■□□□□ 0.08
HMGCS1-201ENST00000325110 USP6P35125 1406 aa15.56■□□□□ 0.08
HMGCS1-201ENST00000325110 HOXC9P31274 260 aa15.56■□□□□ 0.08
HMGCS1-201ENST00000325110 CLTCQ00610 1675 aaKnown RBP15.56■□□□□ 0.08
HMGCS1-201ENST00000325110 CASTP20810 708 aaKnown RBP15.56■□□□□ 0.08
HMGCS1-201ENST00000325110 LGR6Q9HBX8 967 aa15.56■□□□□ 0.08
HMGCS1-201ENST00000325110 KCNQ3O43525 872 aa15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 GADD45BO75293 160 aaPredicted RBP15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 ZNF445P59923 1031 aa15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 CLASRPQ8N2M8 674 aaKnown RBP15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 LRRC59Q96AG4 307 aaKnown RBP15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 TAOK2Q9UL54 1235 aa15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 RGS12O14924 1447 aa15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 LRSAM1Q6UWE0 723 aa15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 PA2G4Q9UQ80 394 aaKnown RBP15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 ESCO1Q5FWF5 840 aa15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 CCDC83Q8IWF9 413 aa15.55■□□□□ 0.08
HMGCS1-201ENST00000325110 IL25Q9H293 177 aa15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 SBNO1A3KN83 1393 aa15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 BTBD11A6QL63 1104 aa15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 C1orf141Q5JVX7 400 aa15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 DNAAF4Q8WXU2 420 aa15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 KIF1BPQ96EK5 621 aa15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 JAKMIP1Q96N16 626 aaKnown RBP15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 SOS1Q07889 1333 aaPredicted RBP15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 WDR33Q9C0J8 1336 aaKnown RBP15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 RICTORQ6R327 1708 aa15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 KCNA6P17658 529 aa15.54■□□□□ 0.08
HMGCS1-201ENST00000325110 PRPF40BQ6NWY9 871 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 1129.5 ms