RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 CAMK4Q16566 473 aa19.9■□□□□ 0.78
PDE1C-201ENST00000321453 RPAP2Q8IXW5 612 aaPredicted RBP19.9■□□□□ 0.78
PDE1C-201ENST00000321453 ADGRB1O14514 1584 aa19.9■□□□□ 0.78
PDE1C-201ENST00000321453 NRXN1Q9ULB1 1477 aa19.9■□□□□ 0.78
PDE1C-201ENST00000321453 MAP4K4O95819 1239 aaPredicted RBP19.89■□□□□ 0.78
PDE1C-201ENST00000321453 INTS4Q96HW7 963 aaKnown RBP19.89■□□□□ 0.78
PDE1C-201ENST00000321453 TRERF1Q96PN7 1200 aa19.89■□□□□ 0.78
PDE1C-201ENST00000321453 CCDC186Q7Z3E2 898 aa19.89■□□□□ 0.77
PDE1C-201ENST00000321453 EMILIN1Q9Y6C2 1016 aa19.89■□□□□ 0.77
PDE1C-201ENST00000321453 RTL1A6NKG5 1358 aa19.89■□□□□ 0.77
PDE1C-201ENST00000321453 FEZ1Q99689 392 aa19.89■□□□□ 0.77
PDE1C-201ENST00000321453 FAM135BQ49AJ0 1406 aa19.88■□□□□ 0.77
PDE1C-201ENST00000321453 UBE2HP62256 183 aa19.88■□□□□ 0.77
PDE1C-201ENST00000321453 LUZP1Q86V48 1076 aa19.88■□□□□ 0.77
PDE1C-201ENST00000321453 UNC5CLQ8IV45 518 aa19.88■□□□□ 0.77
PDE1C-201ENST00000321453 F6X3S4 739 aa19.88■□□□□ 0.77
PDE1C-201ENST00000321453 DNM1Q05193 864 aaKnown RBP19.88■□□□□ 0.77
PDE1C-201ENST00000321453 TNNT1P13805 278 aa19.87■□□□□ 0.77
PDE1C-201ENST00000321453 CPA1P15085 419 aa19.87■□□□□ 0.77
PDE1C-201ENST00000321453 TERF2IPQ9NYB0 399 aa19.87■□□□□ 0.77
PDE1C-201ENST00000321453 SLFN14P0C7P3 912 aa19.87■□□□□ 0.77
PDE1C-201ENST00000321453 ZSCAN22P10073 491 aaPredicted RBP19.87■□□□□ 0.77
PDE1C-201ENST00000321453 POLKQ9UBT6 870 aa19.87■□□□□ 0.77
PDE1C-201ENST00000321453 ZNF853P0CG23 659 aa19.86■□□□□ 0.77
PDE1C-201ENST00000321453 GGT6Q6P531 493 aa19.86■□□□□ 0.77
PDE1C-201ENST00000321453 FUCA2Q9BTY2 467 aa19.86■□□□□ 0.77
PDE1C-201ENST00000321453 ST7Q9NRC1 585 aa19.86■□□□□ 0.77
PDE1C-201ENST00000321453 SETBP1Q9Y6X0 1596 aa19.86■□□□□ 0.77
PDE1C-201ENST00000321453 GOLGA6L6A8MZA4 724 aa19.86■□□□□ 0.77
PDE1C-201ENST00000321453 SYT1P21579 422 aa19.86■□□□□ 0.77
PDE1C-201ENST00000321453 DEPDC5O75140 1603 aa19.86■□□□□ 0.77
PDE1C-201ENST00000321453 NPHP1O15259 732 aa19.85■□□□□ 0.77
PDE1C-201ENST00000321453 IRX5P78411 483 aaPredicted RBP19.85■□□□□ 0.77
PDE1C-201ENST00000321453 CHMLP26374 656 aa19.85■□□□□ 0.77
PDE1C-201ENST00000321453 STX6O43752 255 aa19.85■□□□□ 0.77
PDE1C-201ENST00000321453 CKAP2LQ8IYA6 745 aa19.85■□□□□ 0.77
PDE1C-201ENST00000321453 CABP1Q9NZU7 370 aa19.85■□□□□ 0.77
PDE1C-201ENST00000321453 RGS12O14924 1447 aa19.84■□□□□ 0.77
PDE1C-201ENST00000321453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.84■□□□□ 0.77
PDE1C-201ENST00000321453 DDX41Q9UJV9 622 aaKnown RBP19.84■□□□□ 0.77
PDE1C-201ENST00000321453 DDX54Q8TDD1 881 aaKnown RBP19.83■□□□□ 0.77
PDE1C-201ENST00000321453 GLI2P10070 1586 aa19.83■□□□□ 0.77
PDE1C-201ENST00000321453 TAF3Q5VWG9 929 aa19.83■□□□□ 0.76
PDE1C-201ENST00000321453 CCDC112Q8NEF3 446 aa19.83■□□□□ 0.76
PDE1C-201ENST00000321453 VWDEQ8N2E2 1590 aa19.82■□□□□ 0.76
PDE1C-201ENST00000321453 VPS37CA5D8V6 355 aaPredicted RBP19.82■□□□□ 0.76
PDE1C-201ENST00000321453 F13A1P00488 732 aa19.82■□□□□ 0.76
PDE1C-201ENST00000321453 TPD52L1Q16890 204 aaPredicted RBP19.82■□□□□ 0.76
PDE1C-201ENST00000321453 TMEM87AQ8NBN3 555 aa19.82■□□□□ 0.76
PDE1C-201ENST00000321453 FAM173BQ6P4H8 233 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 HDGFL2Q7Z4V5 671 aaPredicted RBP19.81■□□□□ 0.76
PDE1C-201ENST00000321453 RTF1Q92541 710 aaKnown RBP19.81■□□□□ 0.76
PDE1C-201ENST00000321453 MIS18AQ9NYP9 233 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 SMC3Q9UQE7 1217 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 CAMSAP1Q5T5Y3 1602 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 SMTNL1A8MU46 457 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 LARGE1O95461 756 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 GABPB1Q06547 395 aaPredicted RBP19.81■□□□□ 0.76
PDE1C-201ENST00000321453 KIF18AQ8NI77 898 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 PRAM1Q96QH2 718 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 ZRANB1Q9UGI0 708 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 PNPLA6Q8IY17 1366 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 AK2P54819 239 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 TRIM5Q9C035 493 aa19.81■□□□□ 0.76
PDE1C-201ENST00000321453 HMMRO75330 724 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 CCDC192P0DO97 292 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 FERMT3Q86UX7 667 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 CCDC83Q8IWF9 413 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 ADGRB3O60242 1522 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 ATP7AQ04656 1500 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 ERCC6L2Q5T890 1561 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 SLC4A2P04920 1241 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 TERF2Q15554 542 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 MCM10Q7L590 875 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 IL1RAPL2Q9NP60 686 aa19.8■□□□□ 0.76
PDE1C-201ENST00000321453 G2E3Q7L622 706 aa19.79■□□□□ 0.76
PDE1C-201ENST00000321453 RIMS2Q9UQ26 1411 aa19.79■□□□□ 0.76
PDE1C-201ENST00000321453 EFCAB6Q5THR3 1501 aa19.78■□□□□ 0.76
PDE1C-201ENST00000321453 TPM3P06753 285 aa19.78■□□□□ 0.76
PDE1C-201ENST00000321453 RRS1Q15050 365 aaKnown RBP19.78■□□□□ 0.76
PDE1C-201ENST00000321453 ANAPC15P60006 121 aa19.78■□□□□ 0.76
PDE1C-201ENST00000321453 KMT5BQ4FZB7 885 aa19.78■□□□□ 0.76
PDE1C-201ENST00000321453 ZCCHC11Q5TAX3 1644 aaKnown RBP19.78■□□□□ 0.76
PDE1C-201ENST00000321453 ARHGEF28Q8N1W1 1705 aaKnown RBP19.78■□□□□ 0.76
PDE1C-201ENST00000321453 LIG1P18858 919 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 OSBPL3Q9H4L5 887 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 MROH1Q8NDA8 1641 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 ARID5BQ14865 1188 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 ANO6Q4KMQ2 910 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 ZSCAN25Q6NSZ9 544 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 RUFY3Q7L099 469 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 NUTM1Q86Y26 1132 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 CHMP4AQ9BY43 222 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 LRRCC1Q9C099 1032 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 MRVI1Q9Y6F6 885 aa19.77■□□□□ 0.76
PDE1C-201ENST00000321453 USP27XA6NNY8 438 aa19.77■□□□□ 0.75
PDE1C-201ENST00000321453 GJB2P29033 226 aa19.77■□□□□ 0.75
PDE1C-201ENST00000321453 TYRO3Q06418 890 aa19.77■□□□□ 0.75
PDE1C-201ENST00000321453 RASEFQ8IZ41 740 aa19.77■□□□□ 0.75
PDE1C-201ENST00000321453 FAM200AQ8TCP9 573 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms