RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 C8orf58Q8NAV2 365 aa12.18□□□□□ -0.46
GPHN-201ENST00000315266 CCDC30Q5VVM6 783 aa12.17□□□□□ -0.46
GPHN-201ENST00000315266 FOSBP53539 338 aa12.17□□□□□ -0.46
GPHN-201ENST00000315266 IP6K1Q92551 441 aa12.17□□□□□ -0.46
GPHN-201ENST00000315266 LMTK3Q96Q04 1460 aa12.16□□□□□ -0.46
GPHN-201ENST00000315266 CDK12Q9NYV4 1490 aaPredicted RBP12.16□□□□□ -0.46
GPHN-201ENST00000315266 GNAT3A8MTJ3 354 aa12.16□□□□□ -0.46
GPHN-201ENST00000315266 IFIT2P09913 472 aaKnown RBP12.16□□□□□ -0.46
GPHN-201ENST00000315266 MCCP23508 829 aa12.16□□□□□ -0.46
GPHN-201ENST00000315266 KDM2BQ8NHM5 1336 aa12.16□□□□□ -0.46
GPHN-201ENST00000315266 TRAK2O60296 914 aa12.16□□□□□ -0.46
GPHN-201ENST00000315266 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
GPHN-201ENST00000315266 PTMAP06454 111 aaKnown RBP12.15□□□□□ -0.46
GPHN-201ENST00000315266 STK11IPQ8N1F8 1099 aa12.15□□□□□ -0.46
GPHN-201ENST00000315266 TBC1D2Q9BYX2 928 aa12.15□□□□□ -0.46
GPHN-201ENST00000315266 C1orf167Q5SNV9 1468 aa12.15□□□□□ -0.46
GPHN-201ENST00000315266 EYA1Q99502 592 aa12.15□□□□□ -0.46
GPHN-201ENST00000315266 KIF20BQ96Q89 1820 aa12.15□□□□□ -0.46
GPHN-201ENST00000315266 G3BP1Q13283 466 aaKnown RBP eCLIP12.15□□□□□ -0.46
GPHN-201ENST00000315266 BICDL1Q6ZP65 573 aa12.15□□□□□ -0.46
GPHN-201ENST00000315266 USP31Q70CQ4 1352 aa12.15□□□□□ -0.46
GPHN-201ENST00000315266 ANKRD24Q8TF21 1146 aa12.15□□□□□ -0.46
GPHN-201ENST00000315266 XRN1Q8IZH2 1706 aaKnown RBP12.15□□□□□ -0.47
GPHN-201ENST00000315266 NCOA3Q9Y6Q9 1424 aa12.15□□□□□ -0.47
GPHN-201ENST00000315266 CT47B1P0C2W7 299 aaPredicted RBP12.15□□□□□ -0.47
GPHN-201ENST00000315266 ARHGEF10O15013 1369 aa12.14□□□□□ -0.47
GPHN-201ENST00000315266 CHMP4AQ9BY43 222 aa12.14□□□□□ -0.47
GPHN-201ENST00000315266 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
GPHN-201ENST00000315266 SRGAP3O43295 1099 aa12.14□□□□□ -0.47
GPHN-201ENST00000315266 TOM1O60784 492 aa12.14□□□□□ -0.47
GPHN-201ENST00000315266 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
GPHN-201ENST00000315266 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
GPHN-201ENST00000315266 ARID3AQ99856 593 aa12.14□□□□□ -0.47
GPHN-201ENST00000315266 PNPLA6Q8IY17 1366 aa12.13□□□□□ -0.47
GPHN-201ENST00000315266 IL16Q14005 1332 aa12.13□□□□□ -0.47
GPHN-201ENST00000315266 HSP90B1P14625 803 aaKnown RBP12.13□□□□□ -0.47
GPHN-201ENST00000315266 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
GPHN-201ENST00000315266 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
GPHN-201ENST00000315266 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
GPHN-201ENST00000315266 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
GPHN-201ENST00000315266 ATP5J2-PTCD1G3V325 749 aa12.13□□□□□ -0.47
GPHN-201ENST00000315266 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
GPHN-201ENST00000315266 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
GPHN-201ENST00000315266 DDX49Q9Y6V7 483 aaKnown RBP12.13□□□□□ -0.47
GPHN-201ENST00000315266 CHD2O14647 1828 aaKnown RBP12.13□□□□□ -0.47
GPHN-201ENST00000315266 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
GPHN-201ENST00000315266 IFT57Q9NWB7 429 aa12.12□□□□□ -0.47
GPHN-201ENST00000315266 KIF24Q5T7B8 1368 aa12.12□□□□□ -0.47
GPHN-201ENST00000315266 MCM4P33991 863 aa12.12□□□□□ -0.47
GPHN-201ENST00000315266 APPP05067 770 aa12.12□□□□□ -0.47
GPHN-201ENST00000315266 PLEKHF1Q96S99 279 aa12.12□□□□□ -0.47
GPHN-201ENST00000315266 DNAJC2Q99543 621 aaKnown RBP12.12□□□□□ -0.47
GPHN-201ENST00000315266 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
GPHN-201ENST00000315266 BRINP3Q76B58 766 aa12.11□□□□□ -0.47
GPHN-201ENST00000315266 DCCP43146 1447 aa12.11□□□□□ -0.47
GPHN-201ENST00000315266 MSNP26038 577 aaKnown RBP12.11□□□□□ -0.47
GPHN-201ENST00000315266 GOLGA6L4A6NEF3 574 aa12.11□□□□□ -0.47
GPHN-201ENST00000315266 SRCIN1Q9C0H9 1055 aa12.11□□□□□ -0.47
GPHN-201ENST00000315266 DNTTIP2Q5QJE6 756 aaKnown RBP12.11□□□□□ -0.47
GPHN-201ENST00000315266 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
GPHN-201ENST00000315266 ZBTB3Q9H5J0 574 aa12.11□□□□□ -0.47
GPHN-201ENST00000315266 SPG7Q9UQ90 795 aa12.1□□□□□ -0.47
GPHN-201ENST00000315266 RTL1A6NKG5 1358 aa12.1□□□□□ -0.47
GPHN-201ENST00000315266 GNAI2P04899 355 aa12.1□□□□□ -0.47
GPHN-201ENST00000315266 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
GPHN-201ENST00000315266 AAMPQ13685 434 aa12.1□□□□□ -0.47
GPHN-201ENST00000315266 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
GPHN-201ENST00000315266 GPTP24298 496 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 PI4KAP2A4QPH2 592 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 ARHGEF25Q86VW2 580 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 PI4KAP1Q8N8J0 262 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 ACSBG1Q96GR2 724 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 MTMR7Q9Y216 660 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 UBAP1LF5GYI3 381 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 MEIS3Q99687 375 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 ZNF521Q96K83 1311 aa12.09□□□□□ -0.47
GPHN-201ENST00000315266 MAP2P11137 1827 aaKnown RBP12.09□□□□□ -0.47
GPHN-201ENST00000315266 FMN2Q9NZ56 1722 aa12.08□□□□□ -0.48
GPHN-201ENST00000315266 TBC1D32Q96NH3 1257 aa12.08□□□□□ -0.48
GPHN-201ENST00000315266 FBXW7Q969H0 707 aa12.08□□□□□ -0.48
GPHN-201ENST00000315266 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
GPHN-201ENST00000315266 CHD1LQ86WJ1 897 aa12.08□□□□□ -0.48
GPHN-201ENST00000315266 C16orf71Q8IYS4 520 aaPredicted RBP12.08□□□□□ -0.48
GPHN-201ENST00000315266 CLASRPQ8N2M8 674 aaKnown RBP12.08□□□□□ -0.48
GPHN-201ENST00000315266 GNAI3P08754 354 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 NGLY1Q96IV0 654 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 MST1RQ04912 1400 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 MON2Q7Z3U7 1717 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 ANKRD26Q9UPS8 1709 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 IGSF1Q8N6C5 1336 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 FLIIQ13045 1269 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 WASHC4Q2M389 1173 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 NBPF6Q5VWK0 638 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 NBPF4Q96M43 638 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 LGR6Q9HBX8 967 aa12.07□□□□□ -0.48
GPHN-201ENST00000315266 WWC3Q9ULE0 1092 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms