RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 MPRIPQ6WCQ1 1025 aa13.7□□□□□ -0.22
ATP1A3-201ENST00000302102 ZSCAN30Q86W11 494 aa13.7□□□□□ -0.22
ATP1A3-201ENST00000302102 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
ATP1A3-201ENST00000302102 NEXMIFQ5QGS0 1516 aa13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 CASTP20810 708 aaKnown RBP13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 CLCN1P35523 988 aa13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 USP26Q9BXU7 913 aa13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 DCTPP1Q9H773 170 aa13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 CHAF1AQ13111 956 aaPredicted RBP13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 STK11IPQ8N1F8 1099 aa13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 BICD2Q8TD16 824 aa13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 JAKMIP1Q96N16 626 aaKnown RBP13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 RBSNQ9H1K0 784 aa13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 PHAXQ9H814 394 aaKnown RBP13.69□□□□□ -0.22
ATP1A3-201ENST00000302102 UQCRHLA0A096LP55 91 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 UQCRHP07919 91 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 IL13P35225 146 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 CCDC8Q9H0W5 538 aaPredicted RBP13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 TSPY26PQ9H489 355 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 MYO5BQ9ULV0 1848 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 CCT4P50991 539 aaKnown RBP13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 ESCO1Q5FWF5 840 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 PROSER2Q86WR7 435 aaPredicted RBP13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 CLASRPQ8N2M8 674 aaKnown RBP13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 C17orf53Q8N3J3 647 aaPredicted RBP13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 DNAJC2Q99543 621 aaKnown RBP13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 SRCIN1Q9C0H9 1055 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 ZC3H13Q5T200 1668 aaKnown RBP13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 IL16Q14005 1332 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 MSH6P52701 1360 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 NPHP1O15259 732 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 KLHL40Q2TBA0 621 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 PRPF40BQ6NWY9 871 aaKnown RBP13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 NECAB1Q8N987 351 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 NEUROD6Q96NK8 337 aa13.68□□□□□ -0.22
ATP1A3-201ENST00000302102 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 CCDC85AQ96PX6 553 aaPredicted RBP13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 H3BQV1 296 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 IFFO2Q5TF58 517 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 PPP1R42Q7Z4L9 355 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 DDX11Q96FC9 970 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 FSD1Q9BTV5 496 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 TFIP11Q9UBB9 837 aaKnown RBP13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 ERBB4Q15303 1308 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 PPIP5K1Q6PFW1 1433 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 PI4KAP2A4QPH2 592 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 HCLS1P14317 486 aaPredicted RBP13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 PI4KAP1Q8N8J0 262 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 TSC1Q92574 1164 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 SNX21Q969T3 373 aa13.67□□□□□ -0.22
ATP1A3-201ENST00000302102 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 GPATCH3Q96I76 525 aa13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 BOLA2Q9H3K6 86 aa13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 PALD1Q9ULE6 856 aa13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 PA2G4Q9UQ80 394 aaKnown RBP13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 G3BP1Q13283 466 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 FAM173BQ6P4H8 233 aa13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 PHF14O94880 888 aa13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 ZNF530Q6P9A1 599 aaPredicted RBP13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 AACSQ86V21 672 aa13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
ATP1A3-201ENST00000302102 ZC3H6P61129 1189 aaKnown RBP13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 GIMAP6Q6P9H5 292 aa13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 CKAP2LQ8IYA6 745 aa13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 FMNL2Q96PY5 1086 aa13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 TTC12Q9H892 705 aaPredicted RBP13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 NLRP2Q9NX02 1062 aa13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 TMEM131LA2VDJ0 1609 aa13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 RIMS1Q86UR5 1692 aaKnown RBP13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 GORABQ5T7V8 394 aa13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 CNTROBQ8N137 903 aa13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 CWC22Q9HCG8 908 aaKnown RBP13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 CNPY2Q9Y2B0 182 aa13.65□□□□□ -0.22
ATP1A3-201ENST00000302102 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.23
ATP1A3-201ENST00000302102 NSD2O96028 1365 aa13.64□□□□□ -0.23
ATP1A3-201ENST00000302102 SPATA31D1Q6ZQQ2 1576 aa13.64□□□□□ -0.23
ATP1A3-201ENST00000302102 REREQ9P2R6 1566 aa13.64□□□□□ -0.23
ATP1A3-201ENST00000302102 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
ATP1A3-201ENST00000302102 ROBO2Q9HCK4 1378 aa13.64□□□□□ -0.23
ATP1A3-201ENST00000302102 NSFL1CQ9UNZ2 370 aaKnown RBP13.64□□□□□ -0.23
ATP1A3-201ENST00000302102 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
ATP1A3-201ENST00000302102 GADD45BO75293 160 aaPredicted RBP13.63□□□□□ -0.23
ATP1A3-201ENST00000302102 MBD3O95983 291 aa13.63□□□□□ -0.23
ATP1A3-201ENST00000302102 ARHGAP45Q92619 1136 aa13.63□□□□□ -0.23
ATP1A3-201ENST00000302102 ALKQ9UM73 1620 aa13.63□□□□□ -0.23
ATP1A3-201ENST00000302102 UNC5CLQ8IV45 518 aa13.63□□□□□ -0.23
ATP1A3-201ENST00000302102 TMEM63CQ9P1W3 806 aa13.63□□□□□ -0.23
ATP1A3-201ENST00000302102 TBX22Q9Y458 520 aa13.63□□□□□ -0.23
ATP1A3-201ENST00000302102 TTC21BQ7Z4L5 1316 aa13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 LRRC59Q96AG4 307 aaKnown RBP13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 EYA1Q99502 592 aa13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 LRRC2Q9BYS8 371 aa13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 NDUFB9Q9Y6M9 179 aa13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 FER1L4A9Z1Z3 1794 aa13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 LARP1BQ659C4 914 aaKnown RBP13.62□□□□□ -0.23
ATP1A3-201ENST00000302102 ESYT1Q9BSJ8 1104 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms