RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PRKCSHP14314 528 aaPredicted RBP29.91■■■□□ 2.38
SPTSSA-201ENST00000298130 NASPP49321 788 aaPredicted RBP29.91■■■□□ 2.38
SPTSSA-201ENST00000298130 LMBRD1Q9NUN5 540 aa29.91■■■□□ 2.38
SPTSSA-201ENST00000298130 REREQ9P2R6 1566 aa29.91■■■□□ 2.38
SPTSSA-201ENST00000298130 IL1RAPL2Q9NP60 686 aa29.91■■■□□ 2.38
SPTSSA-201ENST00000298130 NUCB2P80303 420 aa29.9■■■□□ 2.38
SPTSSA-201ENST00000298130 LRRFIP2Q9Y608 721 aaKnown RBP29.9■■■□□ 2.38
SPTSSA-201ENST00000298130 CEP170BQ9Y4F5 1589 aaPredicted RBP29.89■■■□□ 2.38
SPTSSA-201ENST00000298130 MAP4K4O95819 1239 aaPredicted RBP29.89■■■□□ 2.38
SPTSSA-201ENST00000298130 CYP2E1P05181 493 aaPredicted RBP29.89■■■□□ 2.38
SPTSSA-201ENST00000298130 C14orf37Q86TY3 774 aa29.89■■■□□ 2.38
SPTSSA-201ENST00000298130 UNC5CLQ8IV45 518 aa29.89■■■□□ 2.38
SPTSSA-201ENST00000298130 ISY1Q9ULR0 285 aaKnown RBP29.88■■■□□ 2.37
SPTSSA-201ENST00000298130 ANO2Q9NQ90 1003 aa29.88■■■□□ 2.37
SPTSSA-201ENST00000298130 USP31Q70CQ4 1352 aa29.88■■■□□ 2.37
SPTSSA-201ENST00000298130 LRRCC1Q9C099 1032 aa29.87■■■□□ 2.37
SPTSSA-201ENST00000298130 CLEC17AQ6ZS10 378 aa29.86■■■□□ 2.37
SPTSSA-201ENST00000298130 NSFL1CQ9UNZ2 370 aaKnown RBP29.86■■■□□ 2.37
SPTSSA-201ENST00000298130 FLT4P35916 1363 aa29.86■■■□□ 2.37
SPTSSA-201ENST00000298130 MX1P20591 662 aa29.86■■■□□ 2.37
SPTSSA-201ENST00000298130 PTMSP20962 102 aa29.86■■■□□ 2.37
SPTSSA-201ENST00000298130 IL17REQ8NFR9 667 aa29.86■■■□□ 2.37
SPTSSA-201ENST00000298130 ARHGEF10O15013 1369 aa29.85■■■□□ 2.37
SPTSSA-201ENST00000298130 ZSCAN23Q3MJ62 389 aa29.85■■■□□ 2.37
SPTSSA-201ENST00000298130 UPF3BQ9BZI7 483 aaKnown RBP29.85■■■□□ 2.37
SPTSSA-201ENST00000298130 PHAXQ9H814 394 aaKnown RBP29.85■■■□□ 2.37
SPTSSA-201ENST00000298130 GPT2Q8TD30 523 aa29.85■■■□□ 2.37
SPTSSA-201ENST00000298130 ZBTB7CA1YPR0 619 aa29.84■■■□□ 2.37
SPTSSA-201ENST00000298130 NUTM1Q86Y26 1132 aa29.84■■■□□ 2.37
SPTSSA-201ENST00000298130 RBM33Q96EV2 1170 aaKnown RBP29.84■■■□□ 2.37
SPTSSA-201ENST00000298130 TMX3Q96JJ7 454 aa29.84■■■□□ 2.37
SPTSSA-201ENST00000298130 IL25Q9H293 177 aa29.84■■■□□ 2.37
SPTSSA-201ENST00000298130 ESYT1Q9BSJ8 1104 aa29.83■■■□□ 2.37
SPTSSA-201ENST00000298130 EIF2S2P20042 333 aaKnown RBP29.83■■■□□ 2.37
SPTSSA-201ENST00000298130 TPRNQ4KMQ1 711 aa29.83■■■□□ 2.37
SPTSSA-201ENST00000298130 SBNO1A3KN83 1393 aa29.83■■■□□ 2.37
SPTSSA-201ENST00000298130 GNAT3A8MTJ3 354 aa29.82■■■□□ 2.36
SPTSSA-201ENST00000298130 IGSF1Q8N6C5 1336 aa29.82■■■□□ 2.36
SPTSSA-201ENST00000298130 CCDC30Q5VVM6 783 aa29.82■■■□□ 2.36
SPTSSA-201ENST00000298130 OSBPL3Q9H4L5 887 aa29.82■■■□□ 2.36
SPTSSA-201ENST00000298130 SSH2Q76I76 1423 aa29.81■■■□□ 2.36
SPTSSA-201ENST00000298130 PRIM1P49642 420 aaKnown RBP29.81■■■□□ 2.36
SPTSSA-201ENST00000298130 RBSNQ9H1K0 784 aa29.8■■■□□ 2.36
SPTSSA-201ENST00000298130 EID1Q9Y6B2 187 aa29.8■■■□□ 2.36
SPTSSA-201ENST00000298130 DTNBO60941 627 aa29.8■■■□□ 2.36
SPTSSA-201ENST00000298130 ATP8B2P98198 1209 aa29.8■■■□□ 2.36
SPTSSA-201ENST00000298130 CWC22Q9HCG8 908 aaKnown RBP29.79■■■□□ 2.36
SPTSSA-201ENST00000298130 CHMLP26374 656 aa29.79■■■□□ 2.36
SPTSSA-201ENST00000298130 USP44Q9H0E7 712 aa29.79■■■□□ 2.36
SPTSSA-201ENST00000298130 SALL3Q9BXA9 1300 aa29.79■■■□□ 2.36
SPTSSA-201ENST00000298130 RGPD1P0DJD0 1748 aa29.78■■■□□ 2.36
SPTSSA-201ENST00000298130 ANXA1P04083 346 aa29.78■■■□□ 2.36
SPTSSA-201ENST00000298130 HOXC9P31274 260 aa29.78■■■□□ 2.36
SPTSSA-201ENST00000298130 LARP6Q9BRS8 491 aaKnown RBP29.78■■■□□ 2.36
SPTSSA-201ENST00000298130 GNAI3P08754 354 aa29.77■■■□□ 2.36
SPTSSA-201ENST00000298130 ABTB2Q8N961 1025 aa29.77■■■□□ 2.36
SPTSSA-201ENST00000298130 KDRP35968 1356 aa29.77■■■□□ 2.36
SPTSSA-201ENST00000298130 PLEKHG1Q9ULL1 1385 aa29.77■■■□□ 2.36
SPTSSA-201ENST00000298130 UBR1Q8IWV7 1749 aa29.77■■■□□ 2.36
SPTSSA-201ENST00000298130 TTC21AQ8NDW8 1320 aa29.76■■■□□ 2.36
SPTSSA-201ENST00000298130 HDGFL1Q5TGJ6 251 aa29.75■■■□□ 2.35
SPTSSA-201ENST00000298130 TMEM63CQ9P1W3 806 aa29.75■■■□□ 2.35
SPTSSA-201ENST00000298130 SYCE3A1L190 88 aa29.75■■■□□ 2.35
SPTSSA-201ENST00000298130 UBTFL1P0CB47 393 aaPredicted RBP29.75■■■□□ 2.35
SPTSSA-201ENST00000298130 GDPD2Q9HCC8 539 aa29.75■■■□□ 2.35
SPTSSA-201ENST00000298130 ANP32BQ92688 251 aaKnown RBP29.74■■■□□ 2.35
SPTSSA-201ENST00000298130 CCDC173Q0VFZ6 552 aa29.74■■■□□ 2.35
SPTSSA-201ENST00000298130 SURF6O75683 361 aaKnown RBP29.73■■■□□ 2.35
SPTSSA-201ENST00000298130 IBTKQ9P2D0 1353 aaPredicted RBP29.73■■■□□ 2.35
SPTSSA-201ENST00000298130 ZNF445P59923 1031 aa29.72■■■□□ 2.35
SPTSSA-201ENST00000298130 TAF7Q15545 349 aaPredicted RBP29.72■■■□□ 2.35
SPTSSA-201ENST00000298130 PPP1R42Q7Z4L9 355 aa29.72■■■□□ 2.35
SPTSSA-201ENST00000298130 TOPAZ1Q8N9V7 1692 aa29.71■■■□□ 2.35
SPTSSA-201ENST00000298130 KCNQ3O43525 872 aa29.71■■■□□ 2.35
SPTSSA-201ENST00000298130 RNF214Q8ND24 703 aa29.71■■■□□ 2.35
SPTSSA-201ENST00000298130 LGR6Q9HBX8 967 aa29.7■■■□□ 2.35
SPTSSA-201ENST00000298130 RGPD8O14715 1765 aaPredicted RBP29.7■■■□□ 2.35
SPTSSA-201ENST00000298130 NBPF7P0C2Y1 421 aaPredicted RBP29.7■■■□□ 2.34
SPTSSA-201ENST00000298130 KCNA6P17658 529 aa29.69■■■□□ 2.34
SPTSSA-201ENST00000298130 PPP1R9BQ96SB3 815 aa29.69■■■□□ 2.34
SPTSSA-201ENST00000298130 NALCNQ8IZF0 1738 aa29.69■■■□□ 2.34
SPTSSA-201ENST00000298130 MCCP23508 829 aa29.68■■■□□ 2.34
SPTSSA-201ENST00000298130 SRGAP3O43295 1099 aa29.67■■■□□ 2.34
SPTSSA-201ENST00000298130 MAP3K5Q99683 1374 aa29.67■■■□□ 2.34
SPTSSA-201ENST00000298130 CHPF2Q9P2E5 772 aa29.65■■■□□ 2.34
SPTSSA-201ENST00000298130 SOS1Q07889 1333 aaPredicted RBP29.64■■■□□ 2.33
SPTSSA-201ENST00000298130 BRD1O95696 1058 aa29.63■■■□□ 2.33
SPTSSA-201ENST00000298130 PI4KAP2A4QPH2 592 aa29.63■■■□□ 2.33
SPTSSA-201ENST00000298130 CPA1P15085 419 aa29.63■■■□□ 2.33
SPTSSA-201ENST00000298130 PI4KAP1Q8N8J0 262 aa29.63■■■□□ 2.33
SPTSSA-201ENST00000298130 SRCIN1Q9C0H9 1055 aa29.63■■■□□ 2.33
SPTSSA-201ENST00000298130 STAP2Q9UGK3 403 aa29.63■■■□□ 2.33
SPTSSA-201ENST00000298130 RHPN1Q8TCX5 695 aa29.62■■■□□ 2.33
SPTSSA-201ENST00000298130 TBX22Q9Y458 520 aa29.62■■■□□ 2.33
SPTSSA-201ENST00000298130 SETD1BQ9UPS6 1966 aaKnown RBP29.62■■■□□ 2.33
SPTSSA-201ENST00000298130 HTATSF1O43719 755 aaKnown RBP29.62■■■□□ 2.33
SPTSSA-201ENST00000298130 GADD45BO75293 160 aaPredicted RBP29.62■■■□□ 2.33
SPTSSA-201ENST00000298130 ZSCAN30Q86W11 494 aa29.62■■■□□ 2.33
SPTSSA-201ENST00000298130 FMN2Q9NZ56 1722 aa29.62■■■□□ 2.33
SPTSSA-201ENST00000298130 NBPF6Q5VWK0 638 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms