RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 CPSF1Q10570 1443 aaKnown RBP16.28■□□□□ 0.2
KCNIP3-201ENST00000295225 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
KCNIP3-201ENST00000295225 CLGNO14967 610 aa16.27■□□□□ 0.2
KCNIP3-201ENST00000295225 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.2
KCNIP3-201ENST00000295225 NSFL1CQ9UNZ2 370 aaKnown RBP16.27■□□□□ 0.19
KCNIP3-201ENST00000295225 ANKRD26Q9UPS8 1709 aa16.26■□□□□ 0.19
KCNIP3-201ENST00000295225 NCOA3Q9Y6Q9 1424 aa16.26■□□□□ 0.19
KCNIP3-201ENST00000295225 PNMA6EA0A0J9YXQ4 647 aa16.26■□□□□ 0.19
KCNIP3-201ENST00000295225 PATL2C9JE40 543 aaKnown RBP16.26■□□□□ 0.19
KCNIP3-201ENST00000295225 CHL1O00533 1208 aa16.26■□□□□ 0.19
KCNIP3-201ENST00000295225 PRPF40AO75400 957 aaKnown RBP16.26■□□□□ 0.19
KCNIP3-201ENST00000295225 BRPF1P55201 1214 aaPredicted RBP16.26■□□□□ 0.19
KCNIP3-201ENST00000295225 TRIM6-TRIM34B2RNG4 842 aa16.26■□□□□ 0.19
KCNIP3-201ENST00000295225 LMOD3Q0VAK6 560 aa16.26■□□□□ 0.19
KCNIP3-201ENST00000295225 RTL1A6NKG5 1358 aa16.26■□□□□ 0.19
KCNIP3-201ENST00000295225 ANXA1P04083 346 aa16.25■□□□□ 0.19
KCNIP3-201ENST00000295225 FKBP5Q13451 457 aaPredicted RBP16.25■□□□□ 0.19
KCNIP3-201ENST00000295225 INTS3Q68E01 1043 aaKnown RBP16.25■□□□□ 0.19
KCNIP3-201ENST00000295225 UPF3BQ9BZI7 483 aaKnown RBP16.25■□□□□ 0.19
KCNIP3-201ENST00000295225 PALD1Q9ULE6 856 aa16.25■□□□□ 0.19
KCNIP3-201ENST00000295225 UNC5CLQ8IV45 518 aa16.25■□□□□ 0.19
KCNIP3-201ENST00000295225 AMPHP49418 695 aa16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 RTF1Q92541 710 aaKnown RBP16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 TRIM44Q96DX7 344 aaPredicted RBP16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 GDPD2Q9HCC8 539 aa16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 ATP10DQ9P241 1426 aa16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 RIMS1Q86UR5 1692 aaKnown RBP16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 NEK4P51957 841 aa16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 NGDNQ8NEJ9 315 aaKnown RBP16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 IL25Q9H293 177 aa16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 PIK3R4Q99570 1358 aa16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 RGS12O14924 1447 aa16.24■□□□□ 0.19
KCNIP3-201ENST00000295225 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
KCNIP3-201ENST00000295225 EYA1Q99502 592 aa16.23■□□□□ 0.19
KCNIP3-201ENST00000295225 ATP7BP35670 1465 aa16.22■□□□□ 0.19
KCNIP3-201ENST00000295225 TNRQ92752 1358 aa16.22■□□□□ 0.19
KCNIP3-201ENST00000295225 ESPNB1AK53 854 aa16.22■□□□□ 0.19
KCNIP3-201ENST00000295225 NUTM1Q86Y26 1132 aa16.22■□□□□ 0.19
KCNIP3-201ENST00000295225 RNF214Q8ND24 703 aa16.22■□□□□ 0.19
KCNIP3-201ENST00000295225 ZDHHC9Q9Y397 364 aa16.22■□□□□ 0.19
KCNIP3-201ENST00000295225 DDX54Q8TDD1 881 aaKnown RBP16.21■□□□□ 0.19
KCNIP3-201ENST00000295225 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.19
KCNIP3-201ENST00000295225 ANO2Q9NQ90 1003 aa16.21■□□□□ 0.19
KCNIP3-201ENST00000295225 PDE1AP54750 535 aa16.21■□□□□ 0.18
KCNIP3-201ENST00000295225 SETD1BQ9UPS6 1966 aaKnown RBP16.21■□□□□ 0.18
KCNIP3-201ENST00000295225 CDK12Q9NYV4 1490 aaPredicted RBP16.21■□□□□ 0.18
KCNIP3-201ENST00000295225 CERS3Q8IU89 383 aa16.2■□□□□ 0.18
KCNIP3-201ENST00000295225 NASPP49321 788 aaPredicted RBP16.2■□□□□ 0.18
KCNIP3-201ENST00000295225 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
KCNIP3-201ENST00000295225 LRRFIP2Q9Y608 721 aaKnown RBP16.2■□□□□ 0.18
KCNIP3-201ENST00000295225 SPATA31D1Q6ZQQ2 1576 aa16.2■□□□□ 0.18
KCNIP3-201ENST00000295225 NLRP6P59044 892 aa16.19■□□□□ 0.18
KCNIP3-201ENST00000295225 RABEP1Q15276 862 aa16.19■□□□□ 0.18
KCNIP3-201ENST00000295225 RPAP2Q8IXW5 612 aaPredicted RBP16.19■□□□□ 0.18
KCNIP3-201ENST00000295225 PRIM1P49642 420 aaKnown RBP16.18■□□□□ 0.18
KCNIP3-201ENST00000295225 GPT2Q8TD30 523 aa16.18■□□□□ 0.18
KCNIP3-201ENST00000295225 PRDM16Q9HAZ2 1276 aa16.18■□□□□ 0.18
KCNIP3-201ENST00000295225 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.18
KCNIP3-201ENST00000295225 DLC1Q96QB1 1528 aa16.18■□□□□ 0.18
KCNIP3-201ENST00000295225 GOLGA6L22H0YM25 854 aa16.18■□□□□ 0.18
KCNIP3-201ENST00000295225 LMBRD1Q9NUN5 540 aa16.18■□□□□ 0.18
KCNIP3-201ENST00000295225 TMEM51Q9NW97 253 aa16.18■□□□□ 0.18
KCNIP3-201ENST00000295225 CIZ1Q9ULV3 898 aaPredicted RBP16.18■□□□□ 0.18
KCNIP3-201ENST00000295225 TMEM2Q9UHN6 1383 aa16.17■□□□□ 0.18
KCNIP3-201ENST00000295225 IRX3P78415 501 aaPredicted RBP16.17■□□□□ 0.18
KCNIP3-201ENST00000295225 RBSNQ9H1K0 784 aa16.17■□□□□ 0.18
KCNIP3-201ENST00000295225 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
KCNIP3-201ENST00000295225 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
KCNIP3-201ENST00000295225 CPA1P15085 419 aa16.17■□□□□ 0.18
KCNIP3-201ENST00000295225 MMP14P50281 582 aa16.17■□□□□ 0.18
KCNIP3-201ENST00000295225 FLIIQ13045 1269 aa16.17■□□□□ 0.18
KCNIP3-201ENST00000295225 ZSCAN23Q3MJ62 389 aa16.17■□□□□ 0.18
KCNIP3-201ENST00000295225 CDC42BPGQ6DT37 1551 aa16.16■□□□□ 0.18
KCNIP3-201ENST00000295225 AATKQ6ZMQ8 1374 aa16.16■□□□□ 0.18
KCNIP3-201ENST00000295225 SYCE3A1L190 88 aa16.16■□□□□ 0.18
KCNIP3-201ENST00000295225 CLCN1P35523 988 aa16.16■□□□□ 0.18
KCNIP3-201ENST00000295225 AGLP35573 1532 aa16.16■□□□□ 0.18
KCNIP3-201ENST00000295225 ERC2O15083 957 aa16.15■□□□□ 0.18
KCNIP3-201ENST00000295225 KCNQ3O43525 872 aa16.15■□□□□ 0.18
KCNIP3-201ENST00000295225 SETQ01105 290 aaPredicted RBP16.15■□□□□ 0.18
KCNIP3-201ENST00000295225 STK31Q9BXU1 1019 aa16.15■□□□□ 0.18
KCNIP3-201ENST00000295225 CASC1Q6TDU7 716 aa16.15■□□□□ 0.18
KCNIP3-201ENST00000295225 TMX3Q96JJ7 454 aa16.15■□□□□ 0.18
KCNIP3-201ENST00000295225 SETD1AO15047 1707 aaKnown RBP16.15■□□□□ 0.18
KCNIP3-201ENST00000295225 ST18O60284 1047 aa16.15■□□□□ 0.18
KCNIP3-201ENST00000295225 XPCQ01831 940 aaPredicted RBP16.15■□□□□ 0.18
KCNIP3-201ENST00000295225 GNAI2P04899 355 aa16.14■□□□□ 0.17
KCNIP3-201ENST00000295225 IL17REQ8NFR9 667 aa16.14■□□□□ 0.17
KCNIP3-201ENST00000295225 TMEM63CQ9P1W3 806 aa16.14■□□□□ 0.17
KCNIP3-201ENST00000295225 CRB1P82279 1406 aa16.14■□□□□ 0.17
KCNIP3-201ENST00000295225 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
KCNIP3-201ENST00000295225 MX1P20591 662 aa16.13■□□□□ 0.17
KCNIP3-201ENST00000295225 KLHL40Q2TBA0 621 aa16.13■□□□□ 0.17
KCNIP3-201ENST00000295225 EID1Q9Y6B2 187 aa16.13■□□□□ 0.17
KCNIP3-201ENST00000295225 LRRCC1Q9C099 1032 aa16.12■□□□□ 0.17
KCNIP3-201ENST00000295225 PDCL3Q9H2J4 239 aa16.12■□□□□ 0.17
KCNIP3-201ENST00000295225 LGR6Q9HBX8 967 aa16.12■□□□□ 0.17
KCNIP3-201ENST00000295225 PHF14O94880 888 aa16.12■□□□□ 0.17
KCNIP3-201ENST00000295225 ZNF526Q8TF50 670 aaPredicted RBP16.12■□□□□ 0.17
KCNIP3-201ENST00000295225 ANP32BQ92688 251 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms