RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ARHGAP45Q92619 1136 aa15.05■□□□□ -0
PTCD1-201ENST00000292478 ZNF652Q9Y2D9 606 aa15.05■□□□□ -0
PTCD1-201ENST00000292478 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
PTCD1-201ENST00000292478 TRIM27P14373 513 aa15.04■□□□□ -0
PTCD1-201ENST00000292478 ZC3H6P61129 1189 aaKnown RBP15.04■□□□□ -0
PTCD1-201ENST00000292478 AIDAQ96BJ3 306 aa15.04■□□□□ -0
PTCD1-201ENST00000292478 MIS18AQ9NYP9 233 aa15.04■□□□□ -0
PTCD1-201ENST00000292478 PLCH2O75038 1416 aa15.04■□□□□ -0
PTCD1-201ENST00000292478 BRPF3Q9ULD4 1205 aa15.04■□□□□ -0
PTCD1-201ENST00000292478 MAP3K11Q16584 847 aa15.04■□□□□ -0
PTCD1-201ENST00000292478 SPC24Q8NBT2 197 aa15.04■□□□□ -0
PTCD1-201ENST00000292478 CWC15Q9P013 229 aaKnown RBP15.04■□□□□ -0
PTCD1-201ENST00000292478 PUS7Q96PZ0 661 aaKnown RBP15.03■□□□□ -0
PTCD1-201ENST00000292478 SCAND2PQ9GZW5 306 aaPredicted RBP15.03■□□□□ -0
PTCD1-201ENST00000292478 RAI14Q9P0K7 980 aa15.03■□□□□ -0
PTCD1-201ENST00000292478 ASXL1Q8IXJ9 1541 aa15.03■□□□□ -0
PTCD1-201ENST00000292478 DCTN1Q14203 1278 aa15.03■□□□□ -0
PTCD1-201ENST00000292478 BMP2KLQ5H9B9 411 aa15.03■□□□□ -0
PTCD1-201ENST00000292478 LRP2BPQ9P2M1 347 aa15.03■□□□□ -0
PTCD1-201ENST00000292478 METTL24Q5JXM2 366 aa15.03■□□□□ -0
PTCD1-201ENST00000292478 ZNF287Q9HBT7 754 aa15.03■□□□□ -0
PTCD1-201ENST00000292478 TMOD3Q9NYL9 352 aa15.03■□□□□ -0
PTCD1-201ENST00000292478 HSP90AB2PQ58FF8 381 aa15.02■□□□□ -0
PTCD1-201ENST00000292478 ZNF608Q9ULD9 1512 aaPredicted RBP15.02■□□□□ -0
PTCD1-201ENST00000292478 SYCP1Q15431 976 aa15.02■□□□□ -0
PTCD1-201ENST00000292478 BMP2KQ9NSY1 1161 aaPredicted RBP15.02■□□□□ -0
PTCD1-201ENST00000292478 BRPF1P55201 1214 aaPredicted RBP15.02□□□□□ -0.01
PTCD1-201ENST00000292478 UPF3BQ9BZI7 483 aaKnown RBP15.02□□□□□ -0.01
PTCD1-201ENST00000292478 TCOF1Q13428 1488 aaKnown RBP15.02□□□□□ -0.01
PTCD1-201ENST00000292478 IFIT1P09914 478 aaKnown RBP15.02□□□□□ -0.01
PTCD1-201ENST00000292478 CCDC112Q8NEF3 446 aa15.02□□□□□ -0.01
PTCD1-201ENST00000292478 MYD88Q99836 296 aa15.02□□□□□ -0.01
PTCD1-201ENST00000292478 EIF2AK4Q9P2K8 1649 aaKnown RBP15.02□□□□□ -0.01
PTCD1-201ENST00000292478 CCDC196A0A1B0GTZ2 297 aa15.01□□□□□ -0.01
PTCD1-201ENST00000292478 FLIIQ13045 1269 aa15.01□□□□□ -0.01
PTCD1-201ENST00000292478 IDH1O75874 414 aaKnown RBP15.01□□□□□ -0.01
PTCD1-201ENST00000292478 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
PTCD1-201ENST00000292478 PIK3R4Q99570 1358 aa15.01□□□□□ -0.01
PTCD1-201ENST00000292478 SMARCA5O60264 1052 aaPredicted RBP15.01□□□□□ -0.01
PTCD1-201ENST00000292478 EVI5LQ96CN4 794 aa15□□□□□ -0.01
PTCD1-201ENST00000292478 MAPKBP1O60336 1514 aa15□□□□□ -0.01
PTCD1-201ENST00000292478 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
PTCD1-201ENST00000292478 XPCQ01831 940 aaPredicted RBP15□□□□□ -0.01
PTCD1-201ENST00000292478 HDAC1Q13547 482 aaPredicted RBP15□□□□□ -0.01
PTCD1-201ENST00000292478 FBXO31Q5XUX0 539 aaPredicted RBP15□□□□□ -0.01
PTCD1-201ENST00000292478 TEX13AQ9BXU3 409 aaPredicted RBP15□□□□□ -0.01
PTCD1-201ENST00000292478 LIMCH1Q9UPQ0 1083 aa15□□□□□ -0.01
PTCD1-201ENST00000292478 LRRFIP2Q9Y608 721 aaKnown RBP15□□□□□ -0.01
PTCD1-201ENST00000292478 CCDC183Q5T5S1 534 aa15□□□□□ -0.01
PTCD1-201ENST00000292478 TTLL5Q6EMB2 1281 aa15□□□□□ -0.01
PTCD1-201ENST00000292478 PHAXQ9H814 394 aaKnown RBP14.99□□□□□ -0.01
PTCD1-201ENST00000292478 ATP10BO94823 1461 aa14.99□□□□□ -0.01
PTCD1-201ENST00000292478 ESPNB1AK53 854 aa14.99□□□□□ -0.01
PTCD1-201ENST00000292478 KIF2AO00139 706 aaPredicted RBP14.99□□□□□ -0.01
PTCD1-201ENST00000292478 CCDC83Q8IWF9 413 aa14.99□□□□□ -0.01
PTCD1-201ENST00000292478 CAVIN4Q5BKX8 364 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 PRAG1Q86YV5 1406 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 CTAGE5O15320 804 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 ERLIN2O94905 339 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 IFIT5Q13325 482 aaKnown RBP14.98□□□□□ -0.01
PTCD1-201ENST00000292478 CCDC66A2RUB6 948 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 ERLIN1O75477 346 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 BOLA2Q9H3K6 86 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 ATP2B2Q01814 1243 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 MBIPQ9NS73 344 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 ECHDC1Q9NTX5 307 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 ZFYVE27Q5T4F4 411 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 WWC2Q6AWC2 1192 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 DEF6Q9H4E7 631 aa14.98□□□□□ -0.01
PTCD1-201ENST00000292478 CTTNBP2Q8WZ74 1663 aa14.97□□□□□ -0.01
PTCD1-201ENST00000292478 MAP3K12Q12852 859 aa14.97□□□□□ -0.01
PTCD1-201ENST00000292478 IQCEQ6IPM2 695 aa14.97□□□□□ -0.01
PTCD1-201ENST00000292478 ANO10Q9NW15 660 aa14.97□□□□□ -0.01
PTCD1-201ENST00000292478 NUTM2BA6NNL0 878 aaPredicted RBP14.97□□□□□ -0.01
PTCD1-201ENST00000292478 NUTM2EB1AL46 878 aaPredicted RBP14.97□□□□□ -0.01
PTCD1-201ENST00000292478 ZSCAN30Q86W11 494 aa14.97□□□□□ -0.01
PTCD1-201ENST00000292478 NUTM2AQ8IVF1 878 aaPredicted RBP14.97□□□□□ -0.01
PTCD1-201ENST00000292478 F6X3S4 739 aa14.97□□□□□ -0.01
PTCD1-201ENST00000292478 TBC1D2Q9BYX2 928 aa14.97□□□□□ -0.01
PTCD1-201ENST00000292478 PTPRKQ15262 1439 aa14.96□□□□□ -0.01
PTCD1-201ENST00000292478 SLC5A1P13866 664 aa14.96□□□□□ -0.01
PTCD1-201ENST00000292478 RNF41Q9H4P4 317 aaPredicted RBP14.96□□□□□ -0.01
PTCD1-201ENST00000292478 PARD3Q8TEW0 1356 aa14.96□□□□□ -0.01
PTCD1-201ENST00000292478 POLR3AO14802 1390 aaPredicted RBP14.96□□□□□ -0.01
PTCD1-201ENST00000292478 NUP153P49790 1475 aaKnown RBP14.96□□□□□ -0.01
PTCD1-201ENST00000292478 IFNL2Q8IZJ0 200 aa14.96□□□□□ -0.02
PTCD1-201ENST00000292478 MPRIPQ6WCQ1 1025 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 TNRQ92752 1358 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 SYCE3A1L190 88 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 KLHL34Q8N239 644 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 DDX11Q96FC9 970 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 NAPBQ9H115 298 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 A2MP01023 1474 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 TTC22Q5TAA0 569 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 ACEP12821 1306 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 SHANK2Q9UPX8 1470 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 ANKRD18BA2A2Z9 1011 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 STK11IPQ8N1F8 1099 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 USHBP1Q8N6Y0 703 aa14.95□□□□□ -0.02
PTCD1-201ENST00000292478 HMG20BQ9P0W2 317 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms