RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 THUMPD2Q9BTF0 503 aaKnown RBP20.15■□□□□ 0.82
NCK1-201ENST00000288986 CEMIPQ8WUJ3 1361 aa20.14■□□□□ 0.82
NCK1-201ENST00000288986 ASAP1Q9ULH1 1129 aa20.14■□□□□ 0.81
NCK1-201ENST00000288986 EZH2Q15910 746 aaKnown RBP20.14■□□□□ 0.81
NCK1-201ENST00000288986 SALL2Q9Y467 1007 aaPredicted RBP20.14■□□□□ 0.81
NCK1-201ENST00000288986 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
NCK1-201ENST00000288986 ITGB4P16144 1822 aa20.13■□□□□ 0.81
NCK1-201ENST00000288986 TRIM35Q9UPQ4 493 aa20.13■□□□□ 0.81
NCK1-201ENST00000288986 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
NCK1-201ENST00000288986 CAMKK2Q96RR4 588 aa20.12■□□□□ 0.81
NCK1-201ENST00000288986 ATG3Q9NT62 314 aa20.12■□□□□ 0.81
NCK1-201ENST00000288986 DLG5Q8TDM6 1919 aa20.12■□□□□ 0.81
NCK1-201ENST00000288986 SMARCC1Q92922 1105 aaPredicted RBP20.12■□□□□ 0.81
NCK1-201ENST00000288986 BTAF1O14981 1849 aa20.11■□□□□ 0.81
NCK1-201ENST00000288986 BTBD11A6QL63 1104 aa20.11■□□□□ 0.81
NCK1-201ENST00000288986 SLC39A6Q13433 755 aa20.1■□□□□ 0.81
NCK1-201ENST00000288986 PALLDQ8WX93 1383 aa20.1■□□□□ 0.81
NCK1-201ENST00000288986 ADAMTS7Q9UKP4 1686 aa20.1■□□□□ 0.81
NCK1-201ENST00000288986 TAF7Q15545 349 aaPredicted RBP20.1■□□□□ 0.81
NCK1-201ENST00000288986 TXNRD1Q16881 649 aa20.1■□□□□ 0.81
NCK1-201ENST00000288986 PROM2Q8N271 834 aa20.09■□□□□ 0.81
NCK1-201ENST00000288986 MRC1P22897 1456 aa20.08■□□□□ 0.81
NCK1-201ENST00000288986 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.81
NCK1-201ENST00000288986 TTC5Q8N0Z6 440 aa20.08■□□□□ 0.81
NCK1-201ENST00000288986 MIS18AQ9NYP9 233 aa20.08■□□□□ 0.81
NCK1-201ENST00000288986 GTF3C3Q9Y5Q9 886 aa20.08■□□□□ 0.81
NCK1-201ENST00000288986 VIRMAQ69YN4 1812 aaKnown RBP20.08■□□□□ 0.8
NCK1-201ENST00000288986 RBM42Q9BTD8 480 aaKnown RBP20.08■□□□□ 0.8
NCK1-201ENST00000288986 KCNQ4P56696 695 aa20.07■□□□□ 0.8
NCK1-201ENST00000288986 ZNF790Q6PG37 636 aa20.06■□□□□ 0.8
NCK1-201ENST00000288986 CCNL1Q9UK58 526 aaPredicted RBP20.06■□□□□ 0.8
NCK1-201ENST00000288986 LAS1LQ9Y4W2 734 aaKnown RBP20.06■□□□□ 0.8
NCK1-201ENST00000288986 LOC102724428A0A0B4J2F2 783 aa20.06■□□□□ 0.8
NCK1-201ENST00000288986 SIK1P57059 783 aa20.06■□□□□ 0.8
NCK1-201ENST00000288986 CCDC27Q2M243 656 aa20.06■□□□□ 0.8
NCK1-201ENST00000288986 WWC1Q8IX03 1113 aa20.06■□□□□ 0.8
NCK1-201ENST00000288986 SLC27A3Q5K4L6 730 aa20.05■□□□□ 0.8
NCK1-201ENST00000288986 NGEFQ8N5V2 710 aa20.05■□□□□ 0.8
NCK1-201ENST00000288986 ZNF521Q96K83 1311 aa20.04■□□□□ 0.8
NCK1-201ENST00000288986 ATP6V1AP38606 617 aa20.04■□□□□ 0.8
NCK1-201ENST00000288986 LRRC4BQ9NT99 713 aa20.04■□□□□ 0.8
NCK1-201ENST00000288986 CALD1Q05682 793 aaKnown RBP20.04■□□□□ 0.8
NCK1-201ENST00000288986 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
NCK1-201ENST00000288986 KCNQ3O43525 872 aa20.03■□□□□ 0.8
NCK1-201ENST00000288986 TSPYL4Q9UJ04 414 aa20.02■□□□□ 0.8
NCK1-201ENST00000288986 ZNF496Q96IT1 587 aaPredicted RBP20.01■□□□□ 0.79
NCK1-201ENST00000288986 SLC4A9Q96Q91 983 aa20.01■□□□□ 0.79
NCK1-201ENST00000288986 CFAP44Q96MT7 982 aa20■□□□□ 0.79
NCK1-201ENST00000288986 SIPA1L3O60292 1781 aaPredicted RBP20■□□□□ 0.79
NCK1-201ENST00000288986 FMNL2Q96PY5 1086 aa20■□□□□ 0.79
NCK1-201ENST00000288986 RGPD3A6NKT7 1758 aaPredicted RBP19.99■□□□□ 0.79
NCK1-201ENST00000288986 RGPD4Q7Z3J3 1758 aa19.99■□□□□ 0.79
NCK1-201ENST00000288986 CHL1O00533 1208 aa19.99■□□□□ 0.79
NCK1-201ENST00000288986 BABAM1Q9NWV8 329 aa19.99■□□□□ 0.79
NCK1-201ENST00000288986 LY75O60449 1722 aa19.98■□□□□ 0.79
NCK1-201ENST00000288986 GNAI1P63096 354 aa19.98■□□□□ 0.79
NCK1-201ENST00000288986 NBPF14Q5TI25 921 aa19.98■□□□□ 0.79
NCK1-201ENST00000288986 IFT57Q9NWB7 429 aa19.98■□□□□ 0.79
NCK1-201ENST00000288986 ITPK1Q13572 414 aa19.98■□□□□ 0.79
NCK1-201ENST00000288986 HMGB2P26583 209 aaKnown RBP19.97■□□□□ 0.79
NCK1-201ENST00000288986 WDR63Q8IWG1 891 aa19.97■□□□□ 0.79
NCK1-201ENST00000288986 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
NCK1-201ENST00000288986 KCPQ6ZWJ8 1503 aa19.96■□□□□ 0.79
NCK1-201ENST00000288986 ZNF853P0CG23 659 aa19.96■□□□□ 0.79
NCK1-201ENST00000288986 EIF4A1P60842 406 aaKnown RBP19.96■□□□□ 0.79
NCK1-201ENST00000288986 MBIPQ9NS73 344 aa19.96■□□□□ 0.79
NCK1-201ENST00000288986 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.78
NCK1-201ENST00000288986 PAPPAQ13219 1627 aa19.95■□□□□ 0.78
NCK1-201ENST00000288986 DNAJC10Q8IXB1 793 aa19.95■□□□□ 0.78
NCK1-201ENST00000288986 LINC00116Q8NCU8 138 aa19.95■□□□□ 0.78
NCK1-201ENST00000288986 ANO8Q9HCE9 1232 aaPredicted RBP19.94■□□□□ 0.78
NCK1-201ENST00000288986 RREB1Q92766 1687 aa19.94■□□□□ 0.78
NCK1-201ENST00000288986 SNRPA1P09661 255 aaKnown RBP19.94■□□□□ 0.78
NCK1-201ENST00000288986 CDCA7LQ96GN5 454 aa19.94■□□□□ 0.78
NCK1-201ENST00000288986 STK32BQ9NY57 414 aa19.94■□□□□ 0.78
NCK1-201ENST00000288986 IL16Q14005 1332 aa19.94■□□□□ 0.78
NCK1-201ENST00000288986 TEX13AQ9BXU3 409 aaPredicted RBP19.93■□□□□ 0.78
NCK1-201ENST00000288986 PRAMEF22A3QJZ6 481 aa19.92■□□□□ 0.78
NCK1-201ENST00000288986 SLC15A2Q16348 729 aa19.92■□□□□ 0.78
NCK1-201ENST00000288986 TSR2Q969E8 191 aaKnown RBP19.92■□□□□ 0.78
NCK1-201ENST00000288986 TFCP2L1Q9NZI6 479 aa19.92■□□□□ 0.78
NCK1-201ENST00000288986 STARD3NLO95772 234 aa19.92■□□□□ 0.78
NCK1-201ENST00000288986 ZNF827Q17R98 1081 aa19.92■□□□□ 0.78
NCK1-201ENST00000288986 AK7Q96M32 723 aa19.92■□□□□ 0.78
NCK1-201ENST00000288986 UBR2Q8IWV8 1755 aa19.91■□□□□ 0.78
NCK1-201ENST00000288986 NUP188Q5SRE5 1749 aa19.91■□□□□ 0.78
NCK1-201ENST00000288986 GIGYF1O75420 1035 aaPredicted RBP19.91■□□□□ 0.78
NCK1-201ENST00000288986 GOLGA2Q08379 1002 aa19.91■□□□□ 0.78
NCK1-201ENST00000288986 AKT1S1Q96B36 256 aa19.91■□□□□ 0.78
NCK1-201ENST00000288986 SUPT16HQ9Y5B9 1047 aaKnown RBP19.91■□□□□ 0.78
NCK1-201ENST00000288986 USP16Q9Y5T5 823 aa19.91■□□□□ 0.78
NCK1-201ENST00000288986 CRKLP46109 303 aaKnown RBP19.9■□□□□ 0.78
NCK1-201ENST00000288986 R3HDM1Q15032 1099 aaKnown RBP19.9■□□□□ 0.78
NCK1-201ENST00000288986 TRMT2AQ8IZ69 625 aaKnown RBP19.9■□□□□ 0.78
NCK1-201ENST00000288986 SPINK5Q9NQ38 1064 aaPredicted RBP19.9■□□□□ 0.78
NCK1-201ENST00000288986 KDM3BQ7LBC6 1761 aa19.9■□□□□ 0.78
NCK1-201ENST00000288986 CYP19A1P11511 503 aaPredicted RBP19.9■□□□□ 0.78
NCK1-201ENST00000288986 KRT24Q2M2I5 525 aa19.9■□□□□ 0.78
NCK1-201ENST00000288986 RNF123Q5XPI4 1314 aa19.89■□□□□ 0.77
NCK1-201ENST00000288986 C5P01031 1676 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms