RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 EMILIN1Q9Y6C2 1016 aa19.07■□□□□ 0.64
CTDSP1-201ENST00000273062 DZIP1LQ8IYY4 767 aaKnown RBP19.07■□□□□ 0.64
CTDSP1-201ENST00000273062 TRIM35Q9UPQ4 493 aa19.07■□□□□ 0.64
CTDSP1-201ENST00000273062 CPSF1Q10570 1443 aaKnown RBP19.07■□□□□ 0.64
CTDSP1-201ENST00000273062 TMPOP42166 694 aaKnown RBP19.06■□□□□ 0.64
CTDSP1-201ENST00000273062 ST7Q9NRC1 585 aa19.06■□□□□ 0.64
CTDSP1-201ENST00000273062 ADCY5O95622 1261 aa19.06■□□□□ 0.64
CTDSP1-201ENST00000273062 ITPRIPQ8IWB1 547 aa19.06■□□□□ 0.64
CTDSP1-201ENST00000273062 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
CTDSP1-201ENST00000273062 HDGFP51858 240 aaKnown RBP19.05■□□□□ 0.64
CTDSP1-201ENST00000273062 NUCB1Q02818 461 aa19.05■□□□□ 0.64
CTDSP1-201ENST00000273062 KCNF1Q9H3M0 494 aa19.05■□□□□ 0.64
CTDSP1-201ENST00000273062 TECPR2O15040 1411 aa19.05■□□□□ 0.64
CTDSP1-201ENST00000273062 CPS1P31327 1500 aa19.05■□□□□ 0.64
CTDSP1-201ENST00000273062 BMP2KLQ5H9B9 411 aa19.04■□□□□ 0.64
CTDSP1-201ENST00000273062 DIAPH3Q9NSV4 1193 aa19.04■□□□□ 0.64
CTDSP1-201ENST00000273062 FAM135BQ49AJ0 1406 aa19.03■□□□□ 0.64
CTDSP1-201ENST00000273062 HMOX1P09601 288 aa19.03■□□□□ 0.64
CTDSP1-201ENST00000273062 ZKSCAN2Q63HK3 967 aa19.03■□□□□ 0.64
CTDSP1-201ENST00000273062 DHX37Q8IY37 1157 aaKnown RBP19.03■□□□□ 0.64
CTDSP1-201ENST00000273062 KIAA1524Q8TCG1 905 aa19.03■□□□□ 0.64
CTDSP1-201ENST00000273062 TRIM27P14373 513 aa19.03■□□□□ 0.64
CTDSP1-201ENST00000273062 RRS1Q15050 365 aaKnown RBP19.03■□□□□ 0.64
CTDSP1-201ENST00000273062 CCDC61Q9Y6R9 512 aa19.03■□□□□ 0.64
CTDSP1-201ENST00000273062 KNDC1Q76NI1 1749 aa19.02■□□□□ 0.64
CTDSP1-201ENST00000273062 EDC4Q6P2E9 1401 aaKnown RBP19.02■□□□□ 0.63
CTDSP1-201ENST00000273062 CHAF1AQ13111 956 aaPredicted RBP19.02■□□□□ 0.63
CTDSP1-201ENST00000273062 CHD1LQ86WJ1 897 aa19.02■□□□□ 0.63
CTDSP1-201ENST00000273062 MORC2Q9Y6X9 1032 aaPredicted RBP19.02■□□□□ 0.63
CTDSP1-201ENST00000273062 KIF18AQ8NI77 898 aa19.01■□□□□ 0.63
CTDSP1-201ENST00000273062 FEZ2Q9UHY8 353 aaPredicted RBP19.01■□□□□ 0.63
CTDSP1-201ENST00000273062 PTPRUQ92729 1446 aa19.01■□□□□ 0.63
CTDSP1-201ENST00000273062 SOX12O15370 315 aa19.01■□□□□ 0.63
CTDSP1-201ENST00000273062 PRKAR2BP31323 418 aa19.01■□□□□ 0.63
CTDSP1-201ENST00000273062 LRRC7Q96NW7 1537 aa19.01■□□□□ 0.63
CTDSP1-201ENST00000273062 CDC42BPGQ6DT37 1551 aa19■□□□□ 0.63
CTDSP1-201ENST00000273062 SIPA1L2Q9P2F8 1722 aaPredicted RBP19■□□□□ 0.63
CTDSP1-201ENST00000273062 TRHP20396 242 aaPredicted RBP19■□□□□ 0.63
CTDSP1-201ENST00000273062 FOXD4L6Q3SYB3 417 aaPredicted RBP19■□□□□ 0.63
CTDSP1-201ENST00000273062 FOXD4L3Q6VB84 417 aaPredicted RBP19■□□□□ 0.63
CTDSP1-201ENST00000273062 MAP2P11137 1827 aaKnown RBP19■□□□□ 0.63
CTDSP1-201ENST00000273062 PLEKHG1Q9ULL1 1385 aa18.99■□□□□ 0.63
CTDSP1-201ENST00000273062 EXOSC9Q06265 439 aaKnown RBP18.99■□□□□ 0.63
CTDSP1-201ENST00000273062 PHACTR3Q96KR7 559 aa18.99■□□□□ 0.63
CTDSP1-201ENST00000273062 C3P01024 1663 aa18.99■□□□□ 0.63
CTDSP1-201ENST00000273062 GDPD2Q9HCC8 539 aa18.99■□□□□ 0.63
CTDSP1-201ENST00000273062 PLCB2Q00722 1185 aa18.98■□□□□ 0.63
CTDSP1-201ENST00000273062 RNF216Q9NWF9 866 aaPredicted RBP18.98■□□□□ 0.63
CTDSP1-201ENST00000273062 CALCOCO1Q9P1Z2 691 aa18.98■□□□□ 0.63
CTDSP1-201ENST00000273062 TPRNQ4KMQ1 711 aa18.98■□□□□ 0.63
CTDSP1-201ENST00000273062 SIRT1Q96EB6 747 aa18.98■□□□□ 0.63
CTDSP1-201ENST00000273062 AP5Z1O43299 807 aa18.97■□□□□ 0.63
CTDSP1-201ENST00000273062 GADD45BO75293 160 aaPredicted RBP18.97■□□□□ 0.63
CTDSP1-201ENST00000273062 MBD3O95983 291 aa18.97■□□□□ 0.63
CTDSP1-201ENST00000273062 HCLS1P14317 486 aaPredicted RBP18.97■□□□□ 0.63
CTDSP1-201ENST00000273062 TMEM57Q8N5G2 664 aa18.96■□□□□ 0.63
CTDSP1-201ENST00000273062 COG3Q96JB2 828 aa18.96■□□□□ 0.63
CTDSP1-201ENST00000273062 THUMPD2Q9BTF0 503 aaKnown RBP18.96■□□□□ 0.63
CTDSP1-201ENST00000273062 SMARCA5O60264 1052 aaPredicted RBP18.96■□□□□ 0.63
CTDSP1-201ENST00000273062 RABEP1Q15276 862 aa18.96■□□□□ 0.63
CTDSP1-201ENST00000273062 KRT222Q8N1A0 295 aa18.96■□□□□ 0.63
CTDSP1-201ENST00000273062 MON2Q7Z3U7 1717 aa18.96■□□□□ 0.63
CTDSP1-201ENST00000273062 HNRNPH2P55795 449 aaKnown RBP18.95■□□□□ 0.62
CTDSP1-201ENST00000273062 ANKRD45Q5TZF3 282 aa18.95■□□□□ 0.62
CTDSP1-201ENST00000273062 SPC24Q8NBT2 197 aa18.95■□□□□ 0.62
CTDSP1-201ENST00000273062 TMX1Q9H3N1 280 aa18.95■□□□□ 0.62
CTDSP1-201ENST00000273062 FCHSD2O94868 740 aa18.95■□□□□ 0.62
CTDSP1-201ENST00000273062 IL13P35225 146 aa18.95■□□□□ 0.62
CTDSP1-201ENST00000273062 SMC4Q9NTJ3 1288 aa18.95■□□□□ 0.62
CTDSP1-201ENST00000273062 ZBTB40Q9NUA8 1239 aa18.95■□□□□ 0.62
CTDSP1-201ENST00000273062 DDX19BQ9UMR2 479 aa18.94■□□□□ 0.62
CTDSP1-201ENST00000273062 AMOTL2Q9Y2J4 779 aa18.94■□□□□ 0.62
CTDSP1-201ENST00000273062 EID1Q9Y6B2 187 aa18.94■□□□□ 0.62
CTDSP1-201ENST00000273062 ACEP12821 1306 aa18.94■□□□□ 0.62
CTDSP1-201ENST00000273062 RAD51AP2Q09MP3 1159 aa18.94■□□□□ 0.62
CTDSP1-201ENST00000273062 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-201ENST00000273062 C16orf45Q96MC5 204 aaPredicted RBP18.93■□□□□ 0.62
CTDSP1-201ENST00000273062 FER1L4A9Z1Z3 1794 aa18.93■□□□□ 0.62
CTDSP1-201ENST00000273062 KMT5BQ4FZB7 885 aa18.93■□□□□ 0.62
CTDSP1-201ENST00000273062 CWC22Q9HCG8 908 aaKnown RBP18.93■□□□□ 0.62
CTDSP1-201ENST00000273062 AKAP12Q02952 1782 aa18.92■□□□□ 0.62
CTDSP1-201ENST00000273062 ITSN1Q15811 1721 aa18.92■□□□□ 0.62
CTDSP1-201ENST00000273062 SSH1Q8WYL5 1049 aa18.92■□□□□ 0.62
CTDSP1-201ENST00000273062 BRD2P25440 801 aaKnown RBP18.91■□□□□ 0.62
CTDSP1-201ENST00000273062 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.91■□□□□ 0.623e-6■□□□□ 10
CTDSP1-201ENST00000273062 V9GYY5 206 aaPredicted RBP18.91■□□□□ 0.62
CTDSP1-201ENST00000273062 PRR29P0C7W0 189 aa18.9■□□□□ 0.62
CTDSP1-201ENST00000273062 GSPT1P15170 499 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-201ENST00000273062 NOB1Q9ULX3 412 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-201ENST00000273062 CDK12Q9NYV4 1490 aaPredicted RBP18.9■□□□□ 0.62
CTDSP1-201ENST00000273062 TTC21BQ7Z4L5 1316 aa18.9■□□□□ 0.62
CTDSP1-201ENST00000273062 LOC102724159A0A0B4J2E5 919 aa18.9■□□□□ 0.62
CTDSP1-201ENST00000273062 MYCNP04198 464 aaPredicted RBP18.9■□□□□ 0.62
CTDSP1-201ENST00000273062 RBM6P78332 1123 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-201ENST00000273062 PWP2Q15269 919 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-201ENST00000273062 PSEN1P49768 467 aa18.89■□□□□ 0.62
CTDSP1-201ENST00000273062 UVSSAQ2YD98 709 aa18.89■□□□□ 0.62
CTDSP1-201ENST00000273062 ATF7IPQ6VMQ6 1270 aa18.89■□□□□ 0.62
CTDSP1-201ENST00000273062 NFATC2IPQ8NCF5 419 aa18.89■□□□□ 0.62
CTDSP1-201ENST00000273062 USP26Q9BXU7 913 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms