RNA–Protein interactions for RNA: ENST00000265073.8

SUB1-201, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUB1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-201ENST00000265073 RGPD1P0DJD0 1748 aa11.02□□□□□ -0.64
SUB1-201ENST00000265073 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.65
SUB1-201ENST00000265073 CCDC30Q5VVM6 783 aa11.02□□□□□ -0.65
SUB1-201ENST00000265073 PI4KAP2A4QPH2 592 aa11.02□□□□□ -0.65
SUB1-201ENST00000265073 EIF4A1P60842 406 aaKnown RBP11.02□□□□□ -0.65
SUB1-201ENST00000265073 RTL5Q5HYW3 569 aaPredicted RBP11.02□□□□□ -0.65
SUB1-201ENST00000265073 SMC5Q8IY18 1101 aa11.02□□□□□ -0.65
SUB1-201ENST00000265073 PI4KAP1Q8N8J0 262 aa11.02□□□□□ -0.65
SUB1-201ENST00000265073 ARHGAP45Q92619 1136 aa11.02□□□□□ -0.65
SUB1-201ENST00000265073 DAXXQ9UER7 740 aaPredicted RBP11.02□□□□□ -0.65
SUB1-201ENST00000265073 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
SUB1-201ENST00000265073 PIP4K2BP78356 416 aa11.01□□□□□ -0.65
SUB1-201ENST00000265073 AKAP4Q5JQC9 854 aa11.01□□□□□ -0.65
SUB1-201ENST00000265073 SPATA31A3Q5VYP0 1347 aa11.01□□□□□ -0.65
SUB1-201ENST00000265073 PNMA6EA0A0J9YXQ4 647 aa11□□□□□ -0.65
SUB1-201ENST00000265073 PTCD1O75127 700 aaKnown RBP11□□□□□ -0.65
SUB1-201ENST00000265073 EVA1CP58658 441 aa11□□□□□ -0.65
SUB1-201ENST00000265073 ARXQ96QS3 562 aa11□□□□□ -0.65
SUB1-201ENST00000265073 LRRFIP2Q9Y608 721 aaKnown RBP11□□□□□ -0.65
SUB1-201ENST00000265073 TATP17735 454 aaPredicted RBP11□□□□□ -0.65
SUB1-201ENST00000265073 NUCB1Q02818 461 aa11□□□□□ -0.65
SUB1-201ENST00000265073 CEP85Q6P2H3 762 aa11□□□□□ -0.65
SUB1-201ENST00000265073 LARP1Q6PKG0 1096 aaKnown RBP11□□□□□ -0.65
SUB1-201ENST00000265073 SLKQ9H2G2 1235 aaPredicted RBP11□□□□□ -0.65
SUB1-201ENST00000265073 RGS12O14924 1447 aa11□□□□□ -0.65
SUB1-201ENST00000265073 LMTK3Q96Q04 1460 aa11□□□□□ -0.65
SUB1-201ENST00000265073 CYP27B1O15528 508 aa11□□□□□ -0.65
SUB1-201ENST00000265073 ADAMTS2O95450 1211 aa11□□□□□ -0.65
SUB1-201ENST00000265073 CWF19L2Q2TBE0 894 aaKnown RBP11□□□□□ -0.65
SUB1-201ENST00000265073 INTS3Q68E01 1043 aaKnown RBP11□□□□□ -0.65
SUB1-201ENST00000265073 NBPF7P0C2Y1 421 aaPredicted RBP10.99□□□□□ -0.65
SUB1-201ENST00000265073 IL1RAPL2Q9NP60 686 aa10.99□□□□□ -0.65
SUB1-201ENST00000265073 MED1Q15648 1581 aaPredicted RBP10.99□□□□□ -0.65
SUB1-201ENST00000265073 BRPF1P55201 1214 aaPredicted RBP10.98□□□□□ -0.65
SUB1-201ENST00000265073 NUTM2BA6NNL0 878 aaPredicted RBP10.98□□□□□ -0.65
SUB1-201ENST00000265073 NUTM2EB1AL46 878 aaPredicted RBP10.98□□□□□ -0.65
SUB1-201ENST00000265073 NUTM2AQ8IVF1 878 aaPredicted RBP10.98□□□□□ -0.65
SUB1-201ENST00000265073 USP16Q9Y5T5 823 aa10.98□□□□□ -0.65
SUB1-201ENST00000265073 EP400Q96L91 3159 aa10.98□□□□□ -0.65
SUB1-201ENST00000265073 RTL1A6NKG5 1358 aa10.97□□□□□ -0.65
SUB1-201ENST00000265073 ZNF496Q96IT1 587 aaPredicted RBP10.97□□□□□ -0.65
SUB1-201ENST00000265073 AMOTQ4VCS5 1084 aa10.97□□□□□ -0.65
SUB1-201ENST00000265073 HTATSF1O43719 755 aaKnown RBP10.97□□□□□ -0.65
SUB1-201ENST00000265073 MAP4K4O95819 1239 aaPredicted RBP10.97□□□□□ -0.65
SUB1-201ENST00000265073 PTPRCP08575 1304 aa10.96□□□□□ -0.65
SUB1-201ENST00000265073 PHKG2P15735 406 aa10.96□□□□□ -0.65
SUB1-201ENST00000265073 USP44Q9H0E7 712 aa10.96□□□□□ -0.65
SUB1-201ENST00000265073 MEGF6O75095 1541 aa10.96□□□□□ -0.65
SUB1-201ENST00000265073 GIGYF1O75420 1035 aaPredicted RBP10.96□□□□□ -0.65
SUB1-201ENST00000265073 SYTL4Q96C24 671 aaPredicted RBP10.96□□□□□ -0.65
SUB1-201ENST00000265073 BTG4Q9NY30 223 aa10.96□□□□□ -0.65
SUB1-201ENST00000265073 MAP3K2Q9Y2U5 619 aa10.96□□□□□ -0.65
SUB1-201ENST00000265073 ANKRD44Q8N8A2 993 aa10.96□□□□□ -0.66
SUB1-201ENST00000265073 ZNF790Q6PG37 636 aa10.95□□□□□ -0.66
SUB1-201ENST00000265073 FOXD4L1Q9NU39 408 aa10.95□□□□□ -0.66
SUB1-201ENST00000265073 KIF24Q5T7B8 1368 aa10.95□□□□□ -0.66
SUB1-201ENST00000265073 CEMIPQ8WUJ3 1361 aa10.95□□□□□ -0.66
SUB1-201ENST00000265073 GNAI2P04899 355 aa10.95□□□□□ -0.66
SUB1-201ENST00000265073 AAMPQ13685 434 aa10.95□□□□□ -0.66
SUB1-201ENST00000265073 TNS3Q68CZ2 1445 aa10.95□□□□□ -0.66
SUB1-201ENST00000265073 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
SUB1-201ENST00000265073 UBTFL1P0CB47 393 aaPredicted RBP10.95□□□□□ -0.66
SUB1-201ENST00000265073 GSPT1P15170 499 aaKnown RBP10.95□□□□□ -0.66
SUB1-201ENST00000265073 CABP4P57796 275 aa10.95□□□□□ -0.66
SUB1-201ENST00000265073 CCDC9Q9Y3X0 531 aaKnown RBP10.95□□□□□ -0.66
SUB1-201ENST00000265073 DCTPP1Q9H773 170 aa10.94□□□□□ -0.66
SUB1-201ENST00000265073 UPF2Q9HAU5 1272 aaKnown RBP10.94□□□□□ -0.66
SUB1-201ENST00000265073 CCT4P50991 539 aaKnown RBP10.94□□□□□ -0.66
SUB1-201ENST00000265073 NUTM1Q86Y26 1132 aa10.94□□□□□ -0.66
SUB1-201ENST00000265073 PLEKHM2Q8IWE5 1019 aa10.94□□□□□ -0.66
SUB1-201ENST00000265073 IFNL2Q8IZJ0 200 aa10.94□□□□□ -0.66
SUB1-201ENST00000265073 KLHDC4Q8TBB5 520 aa10.94□□□□□ -0.66
SUB1-201ENST00000265073 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
SUB1-201ENST00000265073 SRCIN1Q9C0H9 1055 aa10.94□□□□□ -0.66
SUB1-201ENST00000265073 PA2G4Q9UQ80 394 aaKnown RBP10.94□□□□□ -0.66
SUB1-201ENST00000265073 SPG7Q9UQ90 795 aa10.94□□□□□ -0.66
SUB1-201ENST00000265073 TTC5Q8N0Z6 440 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 GCC1Q96CN9 775 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 SLC52A2Q9HAB3 445 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 DNAAF4Q8WXU2 420 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 SRGAP3O43295 1099 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 SURF6O75683 361 aaKnown RBP10.93□□□□□ -0.66
SUB1-201ENST00000265073 COPS6Q7L5N1 327 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 PPP1R42Q7Z4L9 355 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 C22orf23Q9BZE7 217 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 SIL1Q9H173 461 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 C9orf78Q9NZ63 289 aaPredicted RBP10.93□□□□□ -0.66
SUB1-201ENST00000265073 ATP10DQ9P241 1426 aa10.93□□□□□ -0.66
SUB1-201ENST00000265073 XAGE3Q8WTP9 111 aa10.92□□□□□ -0.66
SUB1-201ENST00000265073 TRPM3Q9HCF6 1732 aaPredicted RBP10.92□□□□□ -0.66
SUB1-201ENST00000265073 TBC1D9Q6ZT07 1266 aa10.92□□□□□ -0.66
SUB1-201ENST00000265073 RIC3Q7Z5B4 369 aa10.92□□□□□ -0.66
SUB1-201ENST00000265073 DBF4Q9UBU7 674 aaPredicted RBP10.92□□□□□ -0.66
SUB1-201ENST00000265073 KDM6AO15550 1401 aaPredicted RBP10.91□□□□□ -0.66
SUB1-201ENST00000265073 A1BGP04217 495 aa10.91□□□□□ -0.66
SUB1-201ENST00000265073 RPAP2Q8IXW5 612 aaPredicted RBP10.91□□□□□ -0.66
SUB1-201ENST00000265073 ZCRB1Q8TBF4 217 aaKnown RBP10.91□□□□□ -0.66
SUB1-201ENST00000265073 RILPL2Q969X0 211 aa10.91□□□□□ -0.66
SUB1-201ENST00000265073 CHMP4BQ9H444 224 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 204.1 ms