RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 IGHDP01880 384 aa16.57■□□□□ 0.24
CDH3-201ENST00000264012 TXLNAP40222 546 aa16.57■□□□□ 0.24
CDH3-201ENST00000264012 FAM13BQ9NYF5 915 aa16.57■□□□□ 0.24
CDH3-201ENST00000264012 CCDC192P0DO97 292 aa16.56■□□□□ 0.24
CDH3-201ENST00000264012 PRPF40BQ6NWY9 871 aaKnown RBP16.56■□□□□ 0.24
CDH3-201ENST00000264012 CCDC8Q9H0W5 538 aaPredicted RBP16.56■□□□□ 0.24
CDH3-201ENST00000264012 IFNL2Q8IZJ0 200 aa16.56■□□□□ 0.24
CDH3-201ENST00000264012 ANKRD24Q8TF21 1146 aa16.56■□□□□ 0.24
CDH3-201ENST00000264012 PPIP5K1Q6PFW1 1433 aa16.56■□□□□ 0.24
CDH3-201ENST00000264012 TNMDQ9H2S6 317 aa16.56■□□□□ 0.24
CDH3-201ENST00000264012 A0A087WZG4 1122 aa16.56■□□□□ 0.24
CDH3-201ENST00000264012 SMC2O95347 1197 aa16.56■□□□□ 0.24
CDH3-201ENST00000264012 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 UBAC1Q9BSL1 405 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 CDKL5O76039 1030 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 GPS2Q13227 327 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 IMMTQ16891 758 aaKnown RBP16.55■□□□□ 0.24
CDH3-201ENST00000264012 CADPS2Q86UW7 1296 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 PUS7Q96PZ0 661 aaKnown RBP16.55■□□□□ 0.24
CDH3-201ENST00000264012 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
CDH3-201ENST00000264012 PI4KAP2A4QPH2 592 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 CCDC173Q0VFZ6 552 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 PI4KAP1Q8N8J0 262 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 ATP2B2Q01814 1243 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 SPATA32Q96LK8 384 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 ABCF2Q9UG63 623 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 MAP3K2Q9Y2U5 619 aa16.55■□□□□ 0.24
CDH3-201ENST00000264012 POLR3AO14802 1390 aaPredicted RBP16.54■□□□□ 0.24
CDH3-201ENST00000264012 IFIT1P09914 478 aaKnown RBP16.54■□□□□ 0.24
CDH3-201ENST00000264012 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
CDH3-201ENST00000264012 ADAMTS2O95450 1211 aa16.54■□□□□ 0.24
CDH3-201ENST00000264012 POLKQ9UBT6 870 aa16.54■□□□□ 0.24
CDH3-201ENST00000264012 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
CDH3-201ENST00000264012 IFIT5Q13325 482 aaKnown RBP16.54■□□□□ 0.24
CDH3-201ENST00000264012 BMP2KLQ5H9B9 411 aa16.54■□□□□ 0.24
CDH3-201ENST00000264012 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
CDH3-201ENST00000264012 PIK3R4Q99570 1358 aa16.54■□□□□ 0.24
CDH3-201ENST00000264012 MNS1Q8NEH6 495 aa16.53■□□□□ 0.24
CDH3-201ENST00000264012 MAP7D2Q96T17 732 aa16.53■□□□□ 0.24
CDH3-201ENST00000264012 CDK5RAP3Q96JB5 506 aa16.53■□□□□ 0.24
CDH3-201ENST00000264012 CFAP45Q9UL16 551 aa16.53■□□□□ 0.24
CDH3-201ENST00000264012 PDIA4P13667 645 aaKnown RBP16.53■□□□□ 0.24
CDH3-201ENST00000264012 CHRNA2Q15822 529 aa16.53■□□□□ 0.24
CDH3-201ENST00000264012 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
CDH3-201ENST00000264012 DDX11Q96FC9 970 aa16.52■□□□□ 0.24
CDH3-201ENST00000264012 CARD14Q9BXL6 1004 aa16.52■□□□□ 0.24
CDH3-201ENST00000264012 ZBTB3Q9H5J0 574 aa16.52■□□□□ 0.24
CDH3-201ENST00000264012 GRPEL1Q9HAV7 217 aa16.52■□□□□ 0.24
CDH3-201ENST00000264012 ZRANB1Q9UGI0 708 aa16.52■□□□□ 0.24
CDH3-201ENST00000264012 EIF4G3O43432 1585 aaKnown RBP16.52■□□□□ 0.24
CDH3-201ENST00000264012 R3HCC1Q9Y3T6 440 aaKnown RBP16.52■□□□□ 0.24
CDH3-201ENST00000264012 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.24
CDH3-201ENST00000264012 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.24
CDH3-201ENST00000264012 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
CDH3-201ENST00000264012 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.23
CDH3-201ENST00000264012 PZPP20742 1482 aa16.52■□□□□ 0.23
CDH3-201ENST00000264012 ANXA1P04083 346 aa16.52■□□□□ 0.23
CDH3-201ENST00000264012 PPP1R42Q7Z4L9 355 aa16.51■□□□□ 0.23
CDH3-201ENST00000264012 MTERF4Q7Z6M4 381 aaKnown RBP16.51■□□□□ 0.23
CDH3-201ENST00000264012 NAP1L1P55209 391 aaKnown RBP16.51■□□□□ 0.23
CDH3-201ENST00000264012 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
CDH3-201ENST00000264012 TBC1D2Q9BYX2 928 aa16.51■□□□□ 0.23
CDH3-201ENST00000264012 ECHDC1Q9NTX5 307 aa16.51■□□□□ 0.23
CDH3-201ENST00000264012 TBC1D9Q6ZT07 1266 aa16.51■□□□□ 0.23
CDH3-201ENST00000264012 EIF2AK4Q9P2K8 1649 aaKnown RBP16.51■□□□□ 0.23
CDH3-201ENST00000264012 OFD1O75665 1012 aa16.51■□□□□ 0.23
CDH3-201ENST00000264012 EPS15P42566 896 aa16.51■□□□□ 0.23
CDH3-201ENST00000264012 FILIP1LQ4L180 1135 aa16.51■□□□□ 0.23
CDH3-201ENST00000264012 FERMT3Q86UX7 667 aa16.51■□□□□ 0.23
CDH3-201ENST00000264012 EXOC5O00471 708 aa16.5■□□□□ 0.23
CDH3-201ENST00000264012 HDAC1Q13547 482 aaPredicted RBP16.5■□□□□ 0.23
CDH3-201ENST00000264012 PCDHB15Q9Y5E8 787 aa16.5■□□□□ 0.23
CDH3-201ENST00000264012 SPC24Q8NBT2 197 aa16.5■□□□□ 0.23
CDH3-201ENST00000264012 ATP5J2-PTCD1G3V325 749 aa16.49■□□□□ 0.23
CDH3-201ENST00000264012 C8orf58Q8NAV2 365 aa16.49■□□□□ 0.23
CDH3-201ENST00000264012 ABCC2Q92887 1545 aa16.49■□□□□ 0.23
CDH3-201ENST00000264012 PER1O15534 1290 aaPredicted RBP16.49■□□□□ 0.23
CDH3-201ENST00000264012 UBE3BQ7Z3V4 1068 aa16.49■□□□□ 0.23
CDH3-201ENST00000264012 MEIS3Q99687 375 aa16.49■□□□□ 0.23
CDH3-201ENST00000264012 NOL7Q9UMY1 257 aaKnown RBP16.49■□□□□ 0.23
CDH3-201ENST00000264012 NUP62CLQ9H1M0 184 aa16.49■□□□□ 0.23
CDH3-201ENST00000264012 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
CDH3-201ENST00000264012 SNRPA1P09661 255 aaKnown RBP16.48■□□□□ 0.23
CDH3-201ENST00000264012 GPTP24298 496 aa16.48■□□□□ 0.23
CDH3-201ENST00000264012 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
CDH3-201ENST00000264012 ZPR1O75312 459 aa16.48■□□□□ 0.23
CDH3-201ENST00000264012 DNMT1P26358 1616 aaKnown RBP16.48■□□□□ 0.23
CDH3-201ENST00000264012 PIP4K2AP48426 406 aaPredicted RBP16.48■□□□□ 0.23
CDH3-201ENST00000264012 BRPF1P55201 1214 aaPredicted RBP16.48■□□□□ 0.23
CDH3-201ENST00000264012 SF3B2Q13435 895 aaKnown RBP16.48■□□□□ 0.23
CDH3-201ENST00000264012 SH2B1Q9NRF2 756 aaPredicted RBP16.48■□□□□ 0.23
CDH3-201ENST00000264012 RBM5P52756 815 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDH3-201ENST00000264012 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
CDH3-201ENST00000264012 EVI5LQ96CN4 794 aa16.47■□□□□ 0.23
CDH3-201ENST00000264012 TTC22Q5TAA0 569 aa16.47■□□□□ 0.23
CDH3-201ENST00000264012 TEX13AQ9BXU3 409 aaPredicted RBP16.47■□□□□ 0.23
CDH3-201ENST00000264012 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
CDH3-201ENST00000264012 PIK3C2GO75747 1445 aa16.47■□□□□ 0.23
CDH3-201ENST00000264012 ANKRD18BA2A2Z9 1011 aa16.47■□□□□ 0.23
CDH3-201ENST00000264012 SERPINC1P01008 464 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms