RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 SIPA1L3O60292 1781 aaPredicted RBP24.73■■□□□ 1.55
CYSTM1-201ENST00000261811 MRC1P22897 1456 aa24.72■■□□□ 1.55
CYSTM1-201ENST00000261811 LMOD3Q0VAK6 560 aa24.72■■□□□ 1.55
CYSTM1-201ENST00000261811 TAF1LQ8IZX4 1826 aa24.71■■□□□ 1.55
CYSTM1-201ENST00000261811 CCDC184Q52MB2 194 aa24.71■■□□□ 1.55
CYSTM1-201ENST00000261811 CCDC146Q8IYE0 955 aa24.71■■□□□ 1.55
CYSTM1-201ENST00000261811 PNISRQ8TF01 805 aaKnown RBP24.7■■□□□ 1.54
CYSTM1-201ENST00000261811 CCNL1Q9UK58 526 aaPredicted RBP24.7■■□□□ 1.54
CYSTM1-201ENST00000261811 PROM2Q8N271 834 aa24.69■■□□□ 1.54
CYSTM1-201ENST00000261811 IL17REQ8NFR9 667 aa24.69■■□□□ 1.54
CYSTM1-201ENST00000261811 C5P01031 1676 aa24.68■■□□□ 1.54
CYSTM1-201ENST00000261811 ZNF831Q5JPB2 1677 aa24.68■■□□□ 1.54
CYSTM1-201ENST00000261811 RIPK4P57078 832 aa24.68■■□□□ 1.54
CYSTM1-201ENST00000261811 ATG3Q9NT62 314 aa24.68■■□□□ 1.54
CYSTM1-201ENST00000261811 ASAP1Q9ULH1 1129 aa24.68■■□□□ 1.54
CYSTM1-201ENST00000261811 TMPOP42166 694 aaKnown RBP24.67■■□□□ 1.54
CYSTM1-201ENST00000261811 CEMIPQ8WUJ3 1361 aa24.67■■□□□ 1.54
CYSTM1-201ENST00000261811 PAPPAQ13219 1627 aa24.67■■□□□ 1.54
CYSTM1-201ENST00000261811 STK32BQ9NY57 414 aa24.66■■□□□ 1.54
CYSTM1-201ENST00000261811 MCM10Q7L590 875 aa24.65■■□□□ 1.54
CYSTM1-201ENST00000261811 TTC5Q8N0Z6 440 aa24.65■■□□□ 1.54
CYSTM1-201ENST00000261811 LOC102724428A0A0B4J2F2 783 aa24.64■■□□□ 1.54
CYSTM1-201ENST00000261811 CCER2I3L3R5 266 aa24.64■■□□□ 1.54
CYSTM1-201ENST00000261811 SIK1P57059 783 aa24.64■■□□□ 1.54
CYSTM1-201ENST00000261811 RBM42Q9BTD8 480 aaKnown RBP24.64■■□□□ 1.54
CYSTM1-201ENST00000261811 NEUROD2Q15784 382 aa24.63■■□□□ 1.53
CYSTM1-201ENST00000261811 UBR2Q8IWV8 1755 aa24.63■■□□□ 1.53
CYSTM1-201ENST00000261811 ATP6V1AP38606 617 aa24.62■■□□□ 1.53
CYSTM1-201ENST00000261811 BTBD11A6QL63 1104 aa24.61■■□□□ 1.53
CYSTM1-201ENST00000261811 FAM9BQ8IZU0 186 aa24.61■■□□□ 1.53
CYSTM1-201ENST00000261811 LRRC4BQ9NT99 713 aa24.61■■□□□ 1.53
CYSTM1-201ENST00000261811 QSER1Q2KHR3 1735 aa24.61■■□□□ 1.53
CYSTM1-201ENST00000261811 DCTN1Q14203 1278 aa24.61■■□□□ 1.53
CYSTM1-201ENST00000261811 TAF7Q15545 349 aaPredicted RBP24.61■■□□□ 1.53
CYSTM1-201ENST00000261811 APAF1O14727 1248 aa24.6■■□□□ 1.53
CYSTM1-201ENST00000261811 PTCD1O75127 700 aaKnown RBP24.6■■□□□ 1.53
CYSTM1-201ENST00000261811 RRP7AQ9Y3A4 280 aaKnown RBP24.6■■□□□ 1.53
CYSTM1-201ENST00000261811 C4BP0C0L5 1744 aa24.59■■□□□ 1.53
CYSTM1-201ENST00000261811 SLC15A2Q16348 729 aa24.59■■□□□ 1.53
CYSTM1-201ENST00000261811 COL5A3P25940 1745 aaPredicted RBP24.58■■□□□ 1.53
CYSTM1-201ENST00000261811 KCNQ4P56696 695 aa24.58■■□□□ 1.52
CYSTM1-201ENST00000261811 SLC39A6Q13433 755 aa24.58■■□□□ 1.52
CYSTM1-201ENST00000261811 R3HDM1Q15032 1099 aaKnown RBP24.58■■□□□ 1.52
CYSTM1-201ENST00000261811 ZNF790Q6PG37 636 aa24.58■■□□□ 1.52
CYSTM1-201ENST00000261811 CICQ96RK0 1608 aaPredicted RBP24.58■■□□□ 1.52
CYSTM1-201ENST00000261811 CALD1Q05682 793 aaKnown RBP24.56■■□□□ 1.52
CYSTM1-201ENST00000261811 KDM3BQ7LBC6 1761 aa24.55■■□□□ 1.52
CYSTM1-201ENST00000261811 PSDA5PKW4 1024 aaPredicted RBP24.55■■□□□ 1.52
CYSTM1-201ENST00000261811 VSIG10Q8N0Z9 540 aa24.55■■□□□ 1.52
CYSTM1-201ENST00000261811 AK7Q96M32 723 aa24.55■■□□□ 1.52
CYSTM1-201ENST00000261811 FMNL2Q96PY5 1086 aa24.55■■□□□ 1.52
CYSTM1-201ENST00000261811 TFCP2L1Q9NZI6 479 aa24.55■■□□□ 1.52
CYSTM1-201ENST00000261811 TJP1Q07157 1748 aa24.54■■□□□ 1.52
CYSTM1-201ENST00000261811 TUBGCP6Q96RT7 1819 aa24.54■■□□□ 1.52
CYSTM1-201ENST00000261811 ANO8Q9HCE9 1232 aaPredicted RBP24.54■■□□□ 1.52
CYSTM1-201ENST00000261811 KCPQ6ZWJ8 1503 aa24.53■■□□□ 1.52
CYSTM1-201ENST00000261811 AKT1S1Q96B36 256 aa24.53■■□□□ 1.52
CYSTM1-201ENST00000261811 TEX13AQ9BXU3 409 aaPredicted RBP24.53■■□□□ 1.52
CYSTM1-201ENST00000261811 BABAM1Q9NWV8 329 aa24.53■■□□□ 1.52
CYSTM1-201ENST00000261811 UBR3Q6ZT12 1888 aa24.52■■□□□ 1.52
CYSTM1-201ENST00000261811 THUMPD2Q9BTF0 503 aaKnown RBP24.52■■□□□ 1.52
CYSTM1-201ENST00000261811 ITPK1Q13572 414 aa24.51■■□□□ 1.51
CYSTM1-201ENST00000261811 NCBP3Q53F19 620 aaKnown RBP24.51■■□□□ 1.51
CYSTM1-201ENST00000261811 MIER1Q8N108 512 aa24.51■■□□□ 1.51
CYSTM1-201ENST00000261811 FLAD1Q8NFF5 587 aa24.51■■□□□ 1.51
CYSTM1-201ENST00000261811 TRIM35Q9UPQ4 493 aa24.51■■□□□ 1.51
CYSTM1-201ENST00000261811 NGEFQ8N5V2 710 aa24.5■■□□□ 1.51
CYSTM1-201ENST00000261811 LINC00116Q8NCU8 138 aa24.5■■□□□ 1.51
CYSTM1-201ENST00000261811 HEG1Q9ULI3 1381 aa24.49■■□□□ 1.51
CYSTM1-201ENST00000261811 ZNF827Q17R98 1081 aa24.49■■□□□ 1.51
CYSTM1-201ENST00000261811 RC3H1Q5TC82 1133 aaKnown RBP24.49■■□□□ 1.51
CYSTM1-201ENST00000261811 ZNF496Q96IT1 587 aaPredicted RBP24.49■■□□□ 1.51
CYSTM1-201ENST00000261811 SLC4A9Q96Q91 983 aa24.49■■□□□ 1.51
CYSTM1-201ENST00000261811 TSPYL4Q9UJ04 414 aa24.49■■□□□ 1.51
CYSTM1-201ENST00000261811 MYH14Q7Z406 1995 aaKnown RBP24.48■■□□□ 1.51
CYSTM1-201ENST00000261811 STARD3NLO95772 234 aa24.48■■□□□ 1.51
CYSTM1-201ENST00000261811 CCDC27Q2M243 656 aa24.48■■□□□ 1.51
CYSTM1-201ENST00000261811 CNTNAP4Q9C0A0 1308 aa24.47■■□□□ 1.51
CYSTM1-201ENST00000261811 CASZ1Q86V15 1759 aa24.47■■□□□ 1.51
CYSTM1-201ENST00000261811 MIS18AQ9NYP9 233 aa24.46■■□□□ 1.51
CYSTM1-201ENST00000261811 LAS1LQ9Y4W2 734 aaKnown RBP24.46■■□□□ 1.51
CYSTM1-201ENST00000261811 LAMB4A4D0S4 1761 aa24.45■■□□□ 1.51
CYSTM1-201ENST00000261811 GNPATO15228 680 aa24.45■■□□□ 1.5
CYSTM1-201ENST00000261811 SNRPA1P09661 255 aaKnown RBP24.45■■□□□ 1.5
CYSTM1-201ENST00000261811 DNAJC10Q8IXB1 793 aa24.45■■□□□ 1.5
CYSTM1-201ENST00000261811 RTCBQ9Y3I0 505 aaKnown RBP24.45■■□□□ 1.5
CYSTM1-201ENST00000261811 MSH5O43196 834 aa24.44■■□□□ 1.5
CYSTM1-201ENST00000261811 KCNQ3O43525 872 aa24.43■■□□□ 1.5
CYSTM1-201ENST00000261811 SSFA2P28290 1259 aa24.43■■□□□ 1.5
CYSTM1-201ENST00000261811 CRKLP46109 303 aaKnown RBP24.43■■□□□ 1.5
CYSTM1-201ENST00000261811 GNAI1P63096 354 aa24.43■■□□□ 1.5
CYSTM1-201ENST00000261811 SLC16A10Q8TF71 515 aa24.43■■□□□ 1.5
CYSTM1-201ENST00000261811 CFAP44Q96MT7 982 aa24.43■■□□□ 1.5
CYSTM1-201ENST00000261811 CCDC87Q9NVE4 849 aa24.42■■□□□ 1.5
CYSTM1-201ENST00000261811 PNPLA7Q6ZV29 1317 aa24.42■■□□□ 1.5
CYSTM1-201ENST00000261811 CHL1O00533 1208 aa24.41■■□□□ 1.5
CYSTM1-201ENST00000261811 RPS6KA4O75676 772 aa24.41■■□□□ 1.5
CYSTM1-201ENST00000261811 CYP19A1P11511 503 aaPredicted RBP24.41■■□□□ 1.5
CYSTM1-201ENST00000261811 ADRA2BP18089 450 aa24.41■■□□□ 1.5
CYSTM1-201ENST00000261811 NPM2Q86SE8 214 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms