RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PSME1Q06323 249 aa15.35■□□□□ 0.05
RAB3IP-201ENST00000247833 PLCB2Q00722 1185 aa15.35■□□□□ 0.05
RAB3IP-201ENST00000247833 DTNBO60941 627 aa15.35■□□□□ 0.05
RAB3IP-201ENST00000247833 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
RAB3IP-201ENST00000247833 SRCIN1Q9C0H9 1055 aa15.35■□□□□ 0.05
RAB3IP-201ENST00000247833 KLHL40Q2TBA0 621 aa15.34■□□□□ 0.05
RAB3IP-201ENST00000247833 KIAA0232Q92628 1395 aa15.34■□□□□ 0.05
RAB3IP-201ENST00000247833 ESCO1Q5FWF5 840 aa15.34■□□□□ 0.05
RAB3IP-201ENST00000247833 TMX3Q96JJ7 454 aa15.34■□□□□ 0.05
RAB3IP-201ENST00000247833 GDPD2Q9HCC8 539 aa15.34■□□□□ 0.05
RAB3IP-201ENST00000247833 USP6P35125 1406 aa15.34■□□□□ 0.05
RAB3IP-201ENST00000247833 AIMP1Q12904 312 aaKnown RBP15.33■□□□□ 0.05
RAB3IP-201ENST00000247833 CWC22Q9HCG8 908 aaKnown RBP15.33■□□□□ 0.05
RAB3IP-201ENST00000247833 C9orf78Q9NZ63 289 aaPredicted RBP15.33■□□□□ 0.05
RAB3IP-201ENST00000247833 KCNA6P17658 529 aa15.33■□□□□ 0.04
RAB3IP-201ENST00000247833 PPP1R42Q7Z4L9 355 aa15.33■□□□□ 0.04
RAB3IP-201ENST00000247833 THEMISQ8N1K5 641 aaPredicted RBP15.33■□□□□ 0.04
RAB3IP-201ENST00000247833 ESYT1Q9BSJ8 1104 aa15.33■□□□□ 0.04
RAB3IP-201ENST00000247833 MPRIPQ6WCQ1 1025 aa15.33■□□□□ 0.04
RAB3IP-201ENST00000247833 SIRT1Q96EB6 747 aa15.33■□□□□ 0.04
RAB3IP-201ENST00000247833 HOXC9P31274 260 aa15.32■□□□□ 0.04
RAB3IP-201ENST00000247833 DDIT3P35638 169 aa15.32■□□□□ 0.04
RAB3IP-201ENST00000247833 IL17REQ8NFR9 667 aa15.32■□□□□ 0.04
RAB3IP-201ENST00000247833 DDX54Q8TDD1 881 aaKnown RBP15.32■□□□□ 0.04
RAB3IP-201ENST00000247833 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
RAB3IP-201ENST00000247833 TTC21AQ8NDW8 1320 aa15.32■□□□□ 0.04
RAB3IP-201ENST00000247833 SYCE3A1L190 88 aa15.32■□□□□ 0.04
RAB3IP-201ENST00000247833 DLC1Q96QB1 1528 aa15.32■□□□□ 0.04
RAB3IP-201ENST00000247833 ZNF530Q6P9A1 599 aaPredicted RBP15.32■□□□□ 0.04
RAB3IP-201ENST00000247833 PALD1Q9ULE6 856 aa15.32■□□□□ 0.04
RAB3IP-201ENST00000247833 ATP8B2P98198 1209 aa15.31■□□□□ 0.04
RAB3IP-201ENST00000247833 CWC27Q6UX04 472 aaKnown RBP15.31■□□□□ 0.04
RAB3IP-201ENST00000247833 MPNDQ8N594 471 aa15.31■□□□□ 0.04
RAB3IP-201ENST00000247833 ATP10DQ9P241 1426 aa15.31■□□□□ 0.04
RAB3IP-201ENST00000247833 PI4KAP2A4QPH2 592 aa15.31■□□□□ 0.04
RAB3IP-201ENST00000247833 PI4KAP1Q8N8J0 262 aa15.31■□□□□ 0.04
RAB3IP-201ENST00000247833 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
RAB3IP-201ENST00000247833 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
RAB3IP-201ENST00000247833 KIF24Q5T7B8 1368 aa15.31■□□□□ 0.04
RAB3IP-201ENST00000247833 ZSCAN23Q3MJ62 389 aa15.3■□□□□ 0.04
RAB3IP-201ENST00000247833 CHPF2Q9P2E5 772 aa15.3■□□□□ 0.04
RAB3IP-201ENST00000247833 ANKRD26Q9UPS8 1709 aa15.3■□□□□ 0.04
RAB3IP-201ENST00000247833 LRRC59Q96AG4 307 aaKnown RBP15.3■□□□□ 0.04
RAB3IP-201ENST00000247833 DIAPH3Q9NSV4 1193 aa15.3■□□□□ 0.04
RAB3IP-201ENST00000247833 CDC42BPGQ6DT37 1551 aa15.3■□□□□ 0.04
RAB3IP-201ENST00000247833 C1orf141Q5JVX7 400 aa15.3■□□□□ 0.04
RAB3IP-201ENST00000247833 CHMLP26374 656 aa15.29■□□□□ 0.04
RAB3IP-201ENST00000247833 LGR6Q9HBX8 967 aa15.29■□□□□ 0.04
RAB3IP-201ENST00000247833 SPG7Q9UQ90 795 aa15.29■□□□□ 0.04
RAB3IP-201ENST00000247833 CCDC9Q9Y3X0 531 aaKnown RBP15.29■□□□□ 0.04
RAB3IP-201ENST00000247833 AK9Q5TCS8 1911 aa15.29■□□□□ 0.04
RAB3IP-201ENST00000247833 NCOA3Q9Y6Q9 1424 aa15.29■□□□□ 0.04
RAB3IP-201ENST00000247833 CLCN1P35523 988 aa15.28■□□□□ 0.04
RAB3IP-201ENST00000247833 CCDC173Q0VFZ6 552 aa15.28■□□□□ 0.04
RAB3IP-201ENST00000247833 USP44Q9H0E7 712 aa15.28■□□□□ 0.04
RAB3IP-201ENST00000247833 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
RAB3IP-201ENST00000247833 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
RAB3IP-201ENST00000247833 PHF8Q9UPP1 1060 aa15.28■□□□□ 0.04
RAB3IP-201ENST00000247833 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
RAB3IP-201ENST00000247833 KCNQ3O43525 872 aa15.28■□□□□ 0.04
RAB3IP-201ENST00000247833 LMBRD1Q9NUN5 540 aa15.28■□□□□ 0.04
RAB3IP-201ENST00000247833 NBPF7P0C2Y1 421 aaPredicted RBP15.27■□□□□ 0.04
RAB3IP-201ENST00000247833 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.03
RAB3IP-201ENST00000247833 CRB1P82279 1406 aa15.27■□□□□ 0.03
RAB3IP-201ENST00000247833 IFIT2P09913 472 aaKnown RBP15.27■□□□□ 0.03
RAB3IP-201ENST00000247833 RHPN1Q8TCX5 695 aa15.27■□□□□ 0.03
RAB3IP-201ENST00000247833 SIL1Q9H173 461 aa15.27■□□□□ 0.03
RAB3IP-201ENST00000247833 CNTROBQ8N137 903 aa15.26■□□□□ 0.03
RAB3IP-201ENST00000247833 DNAAF4Q8WXU2 420 aa15.26■□□□□ 0.03
RAB3IP-201ENST00000247833 MAP3K5Q99683 1374 aa15.26■□□□□ 0.03
RAB3IP-201ENST00000247833 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
RAB3IP-201ENST00000247833 MCM2P49736 904 aa15.25■□□□□ 0.03
RAB3IP-201ENST00000247833 CLASRPQ8N2M8 674 aaKnown RBP15.25■□□□□ 0.03
RAB3IP-201ENST00000247833 CHMP3Q9Y3E7 222 aa15.25■□□□□ 0.03
RAB3IP-201ENST00000247833 RGS12O14924 1447 aa15.25■□□□□ 0.03
RAB3IP-201ENST00000247833 SETD1BQ9UPS6 1966 aaKnown RBP15.25■□□□□ 0.03
RAB3IP-201ENST00000247833 CPA1P15085 419 aa15.25■□□□□ 0.03
RAB3IP-201ENST00000247833 TBX22Q9Y458 520 aa15.25■□□□□ 0.03
RAB3IP-201ENST00000247833 OVOS2A0A0J9YW53 1432 aa15.25■□□□□ 0.03
RAB3IP-201ENST00000247833 OVOS2Q6IE36 1432 aa15.25■□□□□ 0.03
RAB3IP-201ENST00000247833 SPATA31D1Q6ZQQ2 1576 aa15.25■□□□□ 0.03
RAB3IP-201ENST00000247833 ADAMTS13Q76LX8 1427 aa15.24■□□□□ 0.03
RAB3IP-201ENST00000247833 KIF1BPQ96EK5 621 aa15.24■□□□□ 0.03
RAB3IP-201ENST00000247833 PA2G4Q9UQ80 394 aaKnown RBP15.24■□□□□ 0.03
RAB3IP-201ENST00000247833 NBPF6Q5VWK0 638 aa15.24■□□□□ 0.03
RAB3IP-201ENST00000247833 NBPF4Q96M43 638 aa15.24■□□□□ 0.03
RAB3IP-201ENST00000247833 RBSNQ9H1K0 784 aa15.24■□□□□ 0.03
RAB3IP-201ENST00000247833 FIBPO43427 364 aa15.24■□□□□ 0.03
RAB3IP-201ENST00000247833 DNTTIP2Q5QJE6 756 aaKnown RBP15.24■□□□□ 0.03
RAB3IP-201ENST00000247833 ARID3AQ99856 593 aa15.24■□□□□ 0.03
RAB3IP-201ENST00000247833 SOS1Q07889 1333 aaPredicted RBP15.24■□□□□ 0.03
RAB3IP-201ENST00000247833 SYAP1Q96A49 352 aaPredicted RBP15.23■□□□□ 0.03
RAB3IP-201ENST00000247833 SMC3Q9UQE7 1217 aa15.23■□□□□ 0.03
RAB3IP-201ENST00000247833 VPS37CA5D8V6 355 aaPredicted RBP15.23■□□□□ 0.03
RAB3IP-201ENST00000247833 GPT2Q8TD30 523 aa15.23■□□□□ 0.03
RAB3IP-201ENST00000247833 PLEKHG1Q9ULL1 1385 aa15.23■□□□□ 0.03
RAB3IP-201ENST00000247833 PLEKHO1Q53GL0 409 aaPredicted RBP15.23■□□□□ 0.03
RAB3IP-201ENST00000247833 GPATCH3Q96I76 525 aa15.23■□□□□ 0.03
RAB3IP-201ENST00000247833 NSFL1CQ9UNZ2 370 aaKnown RBP15.23■□□□□ 0.03
RAB3IP-201ENST00000247833 CSB-PGBD3P0DP91 1061 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms