RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TPM3P06753 285 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 C17orf53Q8N3J3 647 aaPredicted RBP16.32■□□□□ 0.2
NFKB1-201ENST00000226574 PI4KAP1Q8N8J0 262 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 RAPGEF6Q8TEU7 1601 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 WDR62O43379 1518 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 STX6O43752 255 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 GTF2E1P29083 439 aaPredicted RBP16.32■□□□□ 0.2
NFKB1-201ENST00000226574 FKBP4Q02790 459 aaKnown RBP eCLIP16.32■□□□□ 0.2
NFKB1-201ENST00000226574 G2E3Q7L622 706 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 LIMCH1Q9UPQ0 1083 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
NFKB1-201ENST00000226574 CCDC183Q5T5S1 534 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 LRSAM1Q6UWE0 723 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 ZBTB9Q96C00 473 aa16.32■□□□□ 0.2
NFKB1-201ENST00000226574 ZC3H6P61129 1189 aaKnown RBP16.31■□□□□ 0.2
NFKB1-201ENST00000226574 MAGI2Q86UL8 1455 aa16.31■□□□□ 0.2
NFKB1-201ENST00000226574 GJB2P29033 226 aa16.31■□□□□ 0.2
NFKB1-201ENST00000226574 AKAP17AQ02040 695 aaKnown RBP16.31■□□□□ 0.2
NFKB1-201ENST00000226574 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
NFKB1-201ENST00000226574 ADGRL1O94910 1474 aa16.31■□□□□ 0.2
NFKB1-201ENST00000226574 ZMYM4Q5VZL5 1548 aa16.31■□□□□ 0.2
NFKB1-201ENST00000226574 CCDC34Q96HJ3 373 aa16.31■□□□□ 0.2
NFKB1-201ENST00000226574 USP26Q9BXU7 913 aa16.31■□□□□ 0.2
NFKB1-201ENST00000226574 LRRC2Q9BYS8 371 aa16.31■□□□□ 0.2
NFKB1-201ENST00000226574 RRP12Q5JTH9 1297 aaKnown RBP16.3■□□□□ 0.2
NFKB1-201ENST00000226574 TSC1Q92574 1164 aa16.3■□□□□ 0.2
NFKB1-201ENST00000226574 CEP85Q6P2H3 762 aa16.3■□□□□ 0.2
NFKB1-201ENST00000226574 IL16Q14005 1332 aa16.3■□□□□ 0.2
NFKB1-201ENST00000226574 BLMP54132 1417 aaPredicted RBP16.3■□□□□ 0.2
NFKB1-201ENST00000226574 ERICH4A6NGS2 130 aa16.3■□□□□ 0.2
NFKB1-201ENST00000226574 GLRX3O76003 335 aaKnown RBP16.3■□□□□ 0.2
NFKB1-201ENST00000226574 RAB11FIP4Q86YS3 637 aa16.3■□□□□ 0.2
NFKB1-201ENST00000226574 RBM25P49756 843 aaKnown RBP16.29■□□□□ 0.2
NFKB1-201ENST00000226574 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
NFKB1-201ENST00000226574 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
NFKB1-201ENST00000226574 ESYT1Q9BSJ8 1104 aa16.29■□□□□ 0.2
NFKB1-201ENST00000226574 CEBPAP49715 358 aaPredicted RBP16.29■□□□□ 0.2
NFKB1-201ENST00000226574 DNM1Q05193 864 aaKnown RBP16.29■□□□□ 0.2
NFKB1-201ENST00000226574 ISM2Q6H9L7 571 aa16.29■□□□□ 0.2
NFKB1-201ENST00000226574 FAM173BQ6P4H8 233 aa16.29■□□□□ 0.2
NFKB1-201ENST00000226574 ARHGAP45Q92619 1136 aa16.29■□□□□ 0.2
NFKB1-201ENST00000226574 ANKRD36BQ8N2N9 1353 aa16.28■□□□□ 0.2
NFKB1-201ENST00000226574 ZNF521Q96K83 1311 aa16.28■□□□□ 0.2
NFKB1-201ENST00000226574 CTTNBP2Q8WZ74 1663 aa16.28■□□□□ 0.2
NFKB1-201ENST00000226574 ZKSCAN5Q9Y2L8 839 aa16.28■□□□□ 0.2
NFKB1-201ENST00000226574 A0A1W2PP64 1363 aa16.28■□□□□ 0.2
NFKB1-201ENST00000226574 TRERF1Q96PN7 1200 aa16.28■□□□□ 0.2
NFKB1-201ENST00000226574 GOLGA6L1Q8N7Z2 621 aa16.27■□□□□ 0.2
NFKB1-201ENST00000226574 BIN1O00499 593 aa16.27■□□□□ 0.2
NFKB1-201ENST00000226574 PPP4R3BQ5MIZ7 849 aa16.27■□□□□ 0.19
NFKB1-201ENST00000226574 NAT10Q9H0A0 1025 aaKnown RBP16.27■□□□□ 0.19
NFKB1-201ENST00000226574 PA2G4Q9UQ80 394 aaKnown RBP16.27■□□□□ 0.19
NFKB1-201ENST00000226574 SERPINC1P01008 464 aa16.26■□□□□ 0.19
NFKB1-201ENST00000226574 RHPN1Q8TCX5 695 aa16.26■□□□□ 0.19
NFKB1-201ENST00000226574 TRMT2AQ8IZ69 625 aaKnown RBP16.26■□□□□ 0.19
NFKB1-201ENST00000226574 EIF4A2Q14240 407 aaKnown RBP16.26■□□□□ 0.19
NFKB1-201ENST00000226574 CCDC82Q8N4S0 544 aa16.26■□□□□ 0.19
NFKB1-201ENST00000226574 DNAAF4Q8WXU2 420 aa16.26■□□□□ 0.19
NFKB1-201ENST00000226574 USP19O94966 1318 aa16.26■□□□□ 0.19
NFKB1-201ENST00000226574 PIP4K2AP48426 406 aaPredicted RBP16.25■□□□□ 0.19
NFKB1-201ENST00000226574 ERC1Q8IUD2 1116 aa16.25■□□□□ 0.19
NFKB1-201ENST00000226574 ANTXR1Q9H6X2 564 aa16.25■□□□□ 0.19
NFKB1-201ENST00000226574 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.25■□□□□ 0.19
NFKB1-201ENST00000226574 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
NFKB1-201ENST00000226574 V9GYY5 206 aaPredicted RBP16.25■□□□□ 0.19
NFKB1-201ENST00000226574 DNMT1P26358 1616 aaKnown RBP16.25■□□□□ 0.19
NFKB1-201ENST00000226574 ARHGEF12Q9NZN5 1544 aa16.25■□□□□ 0.19
NFKB1-201ENST00000226574 EVA1CP58658 441 aa16.25■□□□□ 0.19
NFKB1-201ENST00000226574 PCMTD1Q96MG8 357 aaPredicted RBP16.25■□□□□ 0.19
NFKB1-201ENST00000226574 DISP1Q96F81 1524 aa16.25■□□□□ 0.19
NFKB1-201ENST00000226574 NOLC1Q14978 699 aaKnown RBP eCLIP16.25■□□□□ 0.19
NFKB1-201ENST00000226574 TMX1Q9H3N1 280 aa16.24■□□□□ 0.19
NFKB1-201ENST00000226574 ACEP12821 1306 aa16.24■□□□□ 0.19
NFKB1-201ENST00000226574 TNNT1P13805 278 aa16.24■□□□□ 0.19
NFKB1-201ENST00000226574 ZNF165P49910 485 aa16.24■□□□□ 0.19
NFKB1-201ENST00000226574 ZSCAN31Q96LW9 406 aaPredicted RBP16.24■□□□□ 0.19
NFKB1-201ENST00000226574 FANCAO15360 1455 aa16.24■□□□□ 0.19
NFKB1-201ENST00000226574 CLSTN1O94985 981 aa16.24■□□□□ 0.19
NFKB1-201ENST00000226574 KDM5BQ9UGL1 1544 aa16.24■□□□□ 0.19
NFKB1-201ENST00000226574 DENND4BO75064 1496 aaPredicted RBP16.24■□□□□ 0.19
NFKB1-201ENST00000226574 PTCD1O75127 700 aaKnown RBP16.24■□□□□ 0.19
NFKB1-201ENST00000226574 OFD1O75665 1012 aa16.23■□□□□ 0.19
NFKB1-201ENST00000226574 GSPT1P15170 499 aaKnown RBP16.23■□□□□ 0.19
NFKB1-201ENST00000226574 TMEM63CQ9P1W3 806 aa16.23■□□□□ 0.19
NFKB1-201ENST00000226574 PTPRCP08575 1304 aa16.23■□□□□ 0.19
NFKB1-201ENST00000226574 HIP1O00291 1037 aa16.23■□□□□ 0.19
NFKB1-201ENST00000226574 CCDC186Q7Z3E2 898 aa16.23■□□□□ 0.19
NFKB1-201ENST00000226574 CLIP2Q9UDT6 1046 aa16.23■□□□□ 0.19
NFKB1-201ENST00000226574 ANKRD1Q15327 319 aa16.23■□□□□ 0.19
NFKB1-201ENST00000226574 MTHFSDQ2M296 383 aaKnown RBP16.23■□□□□ 0.19
NFKB1-201ENST00000226574 NUP160Q12769 1436 aa16.23■□□□□ 0.19
NFKB1-201ENST00000226574 CD109Q6YHK3 1445 aa16.23■□□□□ 0.19
NFKB1-201ENST00000226574 GADD45BO75293 160 aaPredicted RBP16.22■□□□□ 0.19
NFKB1-201ENST00000226574 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
NFKB1-201ENST00000226574 TSR1Q2NL82 804 aaKnown RBP16.22■□□□□ 0.19
NFKB1-201ENST00000226574 ATP5J2-PTCD1G3V325 749 aa16.22■□□□□ 0.19
NFKB1-201ENST00000226574 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
NFKB1-201ENST00000226574 PHAXQ9H814 394 aaKnown RBP16.22■□□□□ 0.19
NFKB1-201ENST00000226574 SNRKQ9NRH2 765 aa16.22■□□□□ 0.19
NFKB1-201ENST00000226574 ECHDC1Q9NTX5 307 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms