RNA–Protein interactions for RNA: ENST00000220676.1

RP1-201, Transcript of RP1, axonemal microtubule associated, humanhuman

TSL 1 (best) BASIC

Gene RP1, Length 7,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP1-201ENST00000220676 F8W031 263 aaPredicted RBP12.71□□□□□ -0.38
RP1-201ENST00000220676 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.38
RP1-201ENST00000220676 THUMPD2Q9BTF0 503 aaKnown RBP12.71□□□□□ -0.38
RP1-201ENST00000220676 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.38
RP1-201ENST00000220676 GSTTP1A0A1W2PQM5 241 aa12.7□□□□□ -0.38
RP1-201ENST00000220676 RAB11FIP4Q86YS3 637 aa12.7□□□□□ -0.38
RP1-201ENST00000220676 C11orf95C9JLR9 678 aaPredicted RBP12.7□□□□□ -0.38
RP1-201ENST00000220676 RABEP1Q15276 862 aa12.7□□□□□ -0.38
RP1-201ENST00000220676 ERICH4A6NGS2 130 aa12.7□□□□□ -0.38
RP1-201ENST00000220676 CTNNA2P26232 953 aa12.7□□□□□ -0.38
RP1-201ENST00000220676 MAP3K9P80192 1104 aa12.7□□□□□ -0.38
RP1-201ENST00000220676 CFAP100Q494V2 611 aa12.7□□□□□ -0.38
RP1-201ENST00000220676 CACNA2D4Q7Z3S7 1137 aa12.7□□□□□ -0.38
RP1-201ENST00000220676 UPF3BQ9BZI7 483 aaKnown RBP12.7□□□□□ -0.38
RP1-201ENST00000220676 ZNF397Q8NF99 534 aaPredicted RBP12.7□□□□□ -0.38
RP1-201ENST00000220676 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
RP1-201ENST00000220676 NF2P35240 595 aa12.69□□□□□ -0.38
RP1-201ENST00000220676 DNAI2Q9GZS0 605 aa12.69□□□□□ -0.38
RP1-201ENST00000220676 NAPBQ9H115 298 aa12.69□□□□□ -0.38
RP1-201ENST00000220676 CTNNA3Q9UI47 895 aa12.69□□□□□ -0.38
RP1-201ENST00000220676 CBFA2T2O43439 604 aa12.69□□□□□ -0.38
RP1-201ENST00000220676 MRPS9P82933 396 aaKnown RBP12.69□□□□□ -0.38
RP1-201ENST00000220676 MRE11P49959 708 aa12.69□□□□□ -0.38
RP1-201ENST00000220676 MAP2K1Q02750 393 aaPredicted RBP12.69□□□□□ -0.38
RP1-201ENST00000220676 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
RP1-201ENST00000220676 GOLGA6L7A0A1B0GV03 622 aa12.69□□□□□ -0.38
RP1-201ENST00000220676 CCDC83Q8IWF9 413 aa12.69□□□□□ -0.38
RP1-201ENST00000220676 CPLX3Q8WVH0 158 aa12.69□□□□□ -0.38
RP1-201ENST00000220676 GNAT3A8MTJ3 354 aa12.68□□□□□ -0.38
RP1-201ENST00000220676 MBD3O95983 291 aa12.68□□□□□ -0.38
RP1-201ENST00000220676 TERF1P54274 439 aa12.68□□□□□ -0.38
RP1-201ENST00000220676 CCDC91Q7Z6B0 441 aa12.68□□□□□ -0.38
RP1-201ENST00000220676 IFIT1P09914 478 aaKnown RBP12.68□□□□□ -0.38
RP1-201ENST00000220676 C16orf71Q8IYS4 520 aaPredicted RBP12.68□□□□□ -0.38
RP1-201ENST00000220676 CCDC8Q9H0W5 538 aaPredicted RBP12.68□□□□□ -0.38
RP1-201ENST00000220676 LARP1Q6PKG0 1096 aaKnown RBP12.68□□□□□ -0.38
RP1-201ENST00000220676 TXLNBQ8N3L3 684 aa12.68□□□□□ -0.38
RP1-201ENST00000220676 TSG101Q99816 390 aa12.68□□□□□ -0.38
RP1-201ENST00000220676 MCM2P49736 904 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 CCDC7Q96M83 1385 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 NLRP5P59047 1200 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 RBM26Q5T8P6 1007 aaKnown RBP12.67□□□□□ -0.38
RP1-201ENST00000220676 ZNF287Q9HBT7 754 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 HOMER2Q9NSB8 354 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 CFAP45Q9UL16 551 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 KIF20AO95235 890 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 ARL1P40616 181 aaPredicted RBP12.67□□□□□ -0.38
RP1-201ENST00000220676 PRPF40BQ6NWY9 871 aaKnown RBP12.67□□□□□ -0.38
RP1-201ENST00000220676 WASF1Q92558 559 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 BICD1Q96G01 975 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 ZBTB3Q9H5J0 574 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 CETN2P41208 172 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 ACSBG1Q96GR2 724 aa12.67□□□□□ -0.38
RP1-201ENST00000220676 WDR33Q9C0J8 1336 aaKnown RBP12.66□□□□□ -0.38
RP1-201ENST00000220676 ARHGAP29Q52LW3 1261 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 TCERG1LQ5VWI1 586 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 DPH6Q7L8W6 267 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 NUP62CLQ9H1M0 184 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 CEP131Q9UPN4 1083 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 CCT2P78371 535 aaKnown RBP12.66□□□□□ -0.38
RP1-201ENST00000220676 SPA17Q15506 151 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 PLS1Q14651 629 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 ISM2Q6H9L7 571 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 CKAP2LQ8IYA6 745 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 PRPF4BQ13523 1007 aaKnown RBP12.66□□□□□ -0.38
RP1-201ENST00000220676 CHD1LQ86WJ1 897 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.38
RP1-201ENST00000220676 RUSC2Q8N2Y8 1516 aa12.66□□□□□ -0.38
RP1-201ENST00000220676 TDRD12Q587J7 1177 aaKnown RBP12.66□□□□□ -0.38
RP1-201ENST00000220676 K7ELQ4 463 aaPredicted RBP12.65□□□□□ -0.38
RP1-201ENST00000220676 IFIT5Q13325 482 aaKnown RBP12.65□□□□□ -0.38
RP1-201ENST00000220676 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.38
RP1-201ENST00000220676 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
RP1-201ENST00000220676 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.38
RP1-201ENST00000220676 FYCO1Q9BQS8 1478 aa12.65□□□□□ -0.38
RP1-201ENST00000220676 PANK2Q9BZ23 570 aa12.65□□□□□ -0.38
RP1-201ENST00000220676 PABPN1LA6NDY0 278 aaKnown RBP12.65□□□□□ -0.38
RP1-201ENST00000220676 SLC5A1P13866 664 aa12.65□□□□□ -0.38
RP1-201ENST00000220676 LMAN1P49257 510 aa12.65□□□□□ -0.38
RP1-201ENST00000220676 SMC1AQ14683 1233 aaKnown RBP12.65□□□□□ -0.38
RP1-201ENST00000220676 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
RP1-201ENST00000220676 RFC4P35249 363 aa12.65□□□□□ -0.38
RP1-201ENST00000220676 CCDC148Q8NFR7 591 aa12.65□□□□□ -0.38
RP1-201ENST00000220676 SLC12A7Q9Y666 1083 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 FKBP15Q5T1M5 1219 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 CTCFLQ8NI51 663 aaPredicted RBP12.64□□□□□ -0.39
RP1-201ENST00000220676 BRPF3Q9ULD4 1205 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 PRC1O43663 620 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 CEP63Q96MT8 703 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 IQCEQ6IPM2 695 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 ERLIN1O75477 346 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 IFFO1Q0D2I5 559 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 AKAP2Q9Y2D5 859 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 FOXO3O43524 673 aa12.64□□□□□ -0.39
RP1-201ENST00000220676 PRKCSHP14314 528 aaPredicted RBP12.64□□□□□ -0.39
RP1-201ENST00000220676 HOOK3Q86VS8 718 aa12.63□□□□□ -0.39
RP1-201ENST00000220676 SNRKQ9NRH2 765 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms