Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
PdfS4R2K0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
PdfS4R2K0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
PdfS4R2K0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.24□□□□□ -0.45
PdfS4R2K0 Timm23-208ENSMUST00000226683 750 ntBASIC12.24□□□□□ -0.45
PdfS4R2K0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
PdfS4R2K0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
PdfS4R2K0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdfS4R2K0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.23□□□□□ -0.45
PdfS4R2K0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.23□□□□□ -0.45
PdfS4R2K0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Gm37292-201ENSMUST00000192062 758 ntBASIC12.23□□□□□ -0.45
PdfS4R2K0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.23□□□□□ -0.45
PdfS4R2K0 Gm42545-201ENSMUST00000202755 922 ntBASIC12.23□□□□□ -0.45
PdfS4R2K0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PdfS4R2K0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PdfS4R2K0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PdfS4R2K0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
PdfS4R2K0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PdfS4R2K0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.23□□□□□ -0.45
PdfS4R2K0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PdfS4R2K0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
PdfS4R2K0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdfS4R2K0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.22□□□□□ -0.45
PdfS4R2K0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.22□□□□□ -0.45
PdfS4R2K0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Mir5122-201ENSMUST00000175004 89 ntBASIC12.22□□□□□ -0.45
PdfS4R2K0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.22□□□□□ -0.45
PdfS4R2K0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdfS4R2K0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PdfS4R2K0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PdfS4R2K0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PdfS4R2K0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms