Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.48□□□□□ -0.09
H2afb1S4R1E0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Gm13436-201ENSMUST00000120418 567 ntBASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.47□□□□□ -0.09
H2afb1S4R1E0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb1S4R1E0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb1S4R1E0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb1S4R1E0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb1S4R1E0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb1S4R1E0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb1S4R1E0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb1S4R1E0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H2afb1S4R1E0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Mir5130-201ENSMUST00000175160 84 ntBASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Mir1668-201ENSMUST00000184114 107 ntBASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.45□□□□□ -0.1
H2afb1S4R1E0 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H2afb1S4R1E0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms