Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn2Q9R0A1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn2Q9R0A1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn2Q9R0A1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Clcn2Q9R0A1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn2Q9R0A1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Gm11336-201ENSMUST00000118168 334 ntBASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Gm29518-201ENSMUST00000190858 372 ntBASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn2Q9R0A1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn2Q9R0A1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn2Q9R0A1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms