Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Gm715-201ENSMUST00000117865 831 ntBASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.61□□□□□ -0.39
Lsm4Q9QXA5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm4Q9QXA5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Gm11336-201ENSMUST00000118168 334 ntBASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm4Q9QXA5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lsm4Q9QXA5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 BC037039-201ENSMUST00000192003 2205 ntBASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm4Q9QXA5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms