Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Gm9385-201ENSMUST00000117563 472 ntBASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn5aQ9JJV9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 AA543401-201ENSMUST00000164248 1269 ntBASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Gm12008-201ENSMUST00000117791 755 ntBASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn5aQ9JJV9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Gm43474-201ENSMUST00000196415 774 ntBASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn5aQ9JJV9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn5aQ9JJV9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn5aQ9JJV9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Scn5aQ9JJV9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn5aQ9JJV9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn5aQ9JJV9 Gm13365-201ENSMUST00000121188 973 ntBASIC16.33■□□□□ 0.21
Scn5aQ9JJV9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn5aQ9JJV9 Gm20949-201ENSMUST00000206478 952 ntBASIC16.33■□□□□ 0.21
Scn5aQ9JJV9 Thap2-203ENSMUST00000218989 527 ntBASIC16.33■□□□□ 0.21
Scn5aQ9JJV9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Scn5aQ9JJV9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Scn5aQ9JJV9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms