Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Gm11452-201ENSMUST00000122376 690 ntBASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Gm10052-201ENSMUST00000168019 960 ntBASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Gm27459-201ENSMUST00000184860 107 ntBASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Gm7729-201ENSMUST00000050143 801 ntBASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cdc40Q9DC48 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Dancr-204ENSMUST00000132389 2347 ntBASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdc40Q9DC48 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cdc40Q9DC48 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cdc40Q9DC48 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms