Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bl1Q9D701 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Dio3-201ENSMUST00000097228 1449 ntBASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Gm26571-201ENSMUST00000181399 666 ntBASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Gm9731-201ENSMUST00000209480 747 ntBASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Phf7-203ENSMUST00000226565 1971 ntBASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bl1Q9D701 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Actl10-202ENSMUST00000226583 1501 ntBASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bl1Q9D701 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Gm18958-201ENSMUST00000174258 762 ntBASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bl1Q9D701 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bl1Q9D701 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms