Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp48Q9D361 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp48Q9D361 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp48Q9D361 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp48Q9D361 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp48Q9D361 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp48Q9D361 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp48Q9D361 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Gm25406-201ENSMUST00000157599 105 ntBASIC15.89■□□□□ 0.13
Snrnp48Q9D361 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp48Q9D361 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp48Q9D361 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms