Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc3Q9CW03 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Gm15565-201ENSMUST00000118890 427 ntBASIC18.75■□□□□ 0.59
Smc3Q9CW03 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smc3Q9CW03 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.75■□□□□ 0.59
Smc3Q9CW03 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smc3Q9CW03 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.75■□□□□ 0.59
Smc3Q9CW03 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.75■□□□□ 0.59
Smc3Q9CW03 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc3Q9CW03 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc3Q9CW03 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Gm22697-201ENSMUST00000175194 63 ntBASIC18.73■□□□□ 0.59
Smc3Q9CW03 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc3Q9CW03 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.72■□□□□ 0.59
Smc3Q9CW03 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.72■□□□□ 0.59
Smc3Q9CW03 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Gm11355-201ENSMUST00000121120 306 ntBASIC18.72■□□□□ 0.59
Smc3Q9CW03 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Smc3Q9CW03 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.72■□□□□ 0.59
Smc3Q9CW03 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms