Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldnd1Q9CQX5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cldnd1Q9CQX5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.27■□□□□ 0.19
Cldnd1Q9CQX5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldnd1Q9CQX5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldnd1Q9CQX5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldnd1Q9CQX5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldnd1Q9CQX5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Gm22175-201ENSMUST00000175007 78 ntBASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Gm43125-201ENSMUST00000201724 730 ntBASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Gm19164-201ENSMUST00000210667 640 ntBASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldnd1Q9CQX5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Gm18889-201ENSMUST00000174284 929 ntBASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldnd1Q9CQX5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Gm43438-201ENSMUST00000198133 379 ntBASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldnd1Q9CQX5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Thap2-203ENSMUST00000218989 527 ntBASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cldnd1Q9CQX5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms