Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Gm4974-201ENSMUST00000209974 875 ntBASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTRAFQ9CQE8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RTRAFQ9CQE8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTRAFQ9CQE8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Gm26524-201ENSMUST00000192339 390 ntBASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms