Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac9Q99N13 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac9Q99N13 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.69■□□□□ 0.58
Hdac9Q99N13 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hdac9Q99N13 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac9Q99N13 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hdac9Q99N13 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac9Q99N13 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hdac9Q99N13 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac9Q99N13 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.69■□□□□ 0.58
Hdac9Q99N13 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac9Q99N13 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac9Q99N13 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Gm9682-201ENSMUST00000197505 556 ntBASIC18.68■□□□□ 0.58
Hdac9Q99N13 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac9Q99N13 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.67■□□□□ 0.58
Hdac9Q99N13 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Hdac9Q99N13 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.66■□□□□ 0.58
Hdac9Q99N13 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Gm6257-201ENSMUST00000163864 910 ntBASIC18.66■□□□□ 0.58
Hdac9Q99N13 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.66■□□□□ 0.58
Hdac9Q99N13 Gm44492-201ENSMUST00000197012 141 ntBASIC18.66■□□□□ 0.58
Hdac9Q99N13 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.66■□□□□ 0.58
Hdac9Q99N13 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.66■□□□□ 0.58
Hdac9Q99N13 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Hdac9Q99N13 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac9Q99N13 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Hdac9Q99N13 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.65■□□□□ 0.58
Hdac9Q99N13 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.65■□□□□ 0.58
Hdac9Q99N13 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.65■□□□□ 0.58
Hdac9Q99N13 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac9Q99N13 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
Hdac9Q99N13 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hdac9Q99N13 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms