Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smc1bQ920F6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Gm14494-201ENSMUST00000118786 435 ntBASIC18.34■□□□□ 0.53
Smc1bQ920F6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Gm7230-201ENSMUST00000173026 815 ntBASIC18.34■□□□□ 0.53
Smc1bQ920F6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.34■□□□□ 0.53
Smc1bQ920F6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smc1bQ920F6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc1bQ920F6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc1bQ920F6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc1bQ920F6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smc1bQ920F6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smc1bQ920F6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Smc1bQ920F6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Gm25990-201ENSMUST00000102440 86 ntBASIC18.33■□□□□ 0.52
Smc1bQ920F6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Gm10576-201ENSMUST00000191927 825 ntBASIC18.33■□□□□ 0.52
Smc1bQ920F6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.33■□□□□ 0.52
Smc1bQ920F6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.33■□□□□ 0.52
Smc1bQ920F6 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.33■□□□□ 0.52
Smc1bQ920F6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Smc1bQ920F6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Gm44430-201ENSMUST00000203376 995 ntBASIC18.32■□□□□ 0.52
Smc1bQ920F6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.32■□□□□ 0.52
Smc1bQ920F6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.32■□□□□ 0.52
Smc1bQ920F6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Smc1bQ920F6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms