Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Gm27357-201ENSMUST00000183754 135 ntBASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb6Q91XZ4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb6Q91XZ4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb6Q91XZ4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Pcdhb6Q91XZ4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb6Q91XZ4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Pcdhb6Q91XZ4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb6Q91XZ4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb6Q91XZ4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Pcdhb6Q91XZ4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb6Q91XZ4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb6Q91XZ4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Gm15372-201ENSMUST00000120729 834 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms