Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhga9Q91XX9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga9Q91XX9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga9Q91XX9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhga9Q91XX9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhga9Q91XX9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhga9Q91XX9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga9Q91XX9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhga9Q91XX9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Gm44454-201ENSMUST00000198541 138 ntBASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhga9Q91XX9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Gm15372-201ENSMUST00000120729 834 ntBASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga9Q91XX9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Gm13884-201ENSMUST00000118103 829 ntBASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms