Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc5Q91XW9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Gm14494-201ENSMUST00000118786 435 ntBASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Gm7230-201ENSMUST00000173026 815 ntBASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Gm4535-201ENSMUST00000182274 558 ntBASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Gm10355-201ENSMUST00000097146 517 ntBASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhgc5Q91XW9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.11■□□□□ 0.49
Pcdhgc5Q91XW9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Gm14822-201ENSMUST00000122247 291 ntBASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgc5Q91XW9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgc5Q91XW9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms