Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trex1Q91XB0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trex1Q91XB0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.21■□□□□ 0.51
Trex1Q91XB0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.21■□□□□ 0.51
Trex1Q91XB0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trex1Q91XB0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trex1Q91XB0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.2■□□□□ 0.5
Trex1Q91XB0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.2■□□□□ 0.5
Trex1Q91XB0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trex1Q91XB0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trex1Q91XB0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Gm19164-201ENSMUST00000210667 640 ntBASIC18.19■□□□□ 0.5
Trex1Q91XB0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trex1Q91XB0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.18■□□□□ 0.5
Trex1Q91XB0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.18■□□□□ 0.5
Trex1Q91XB0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.18■□□□□ 0.5
Trex1Q91XB0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trex1Q91XB0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trex1Q91XB0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trex1Q91XB0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms