Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TraipQ8VIG6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Gm5264-201ENSMUST00000190584 848 ntBASIC16.9■□□□□ 0.3
TraipQ8VIG6 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.9■□□□□ 0.3
TraipQ8VIG6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.9■□□□□ 0.3
TraipQ8VIG6 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.9■□□□□ 0.3
TraipQ8VIG6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TraipQ8VIG6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TraipQ8VIG6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TraipQ8VIG6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.89■□□□□ 0.29
TraipQ8VIG6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.89■□□□□ 0.29
TraipQ8VIG6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TraipQ8VIG6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Gm18489-201ENSMUST00000172565 551 ntBASIC16.88■□□□□ 0.29
TraipQ8VIG6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TraipQ8VIG6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms