Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Gm12350-201ENSMUST00000121208 462 ntBASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Gm37935-201ENSMUST00000192012 982 ntBASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Dnajc28Q8VCE1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Dnajc28Q8VCE1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dnajc28Q8VCE1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Gm13418-201ENSMUST00000119097 944 ntBASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Gm15173-201ENSMUST00000122049 433 ntBASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Gm5364-201ENSMUST00000216789 889 ntBASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dnajc28Q8VCE1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Gm11594-201ENSMUST00000122313 162 ntBASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Gm4535-201ENSMUST00000182274 558 ntBASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.34■□□□□ 0.37
Dnajc28Q8VCE1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms