Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 Gm37277-201ENSMUST00000194052 1111 ntBASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx54Q8K4L0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Gm18246-201ENSMUST00000221023 728 ntBASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx54Q8K4L0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Gm13223-201ENSMUST00000118609 747 ntBASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Gm18057-201ENSMUST00000208220 503 ntBASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx54Q8K4L0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Ddx54Q8K4L0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx54Q8K4L0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx54Q8K4L0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.77■□□□□ 0.92
Ddx54Q8K4L0 Gm19164-201ENSMUST00000210667 640 ntBASIC20.77■□□□□ 0.92
Ddx54Q8K4L0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx54Q8K4L0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx54Q8K4L0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx54Q8K4L0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx54Q8K4L0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx54Q8K4L0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Gm27989-201ENSMUST00000184721 107 ntBASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx54Q8K4L0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms