Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim68Q8K243 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trim68Q8K243 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Gm14494-201ENSMUST00000118786 435 ntBASIC17.27■□□□□ 0.36
Trim68Q8K243 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.27■□□□□ 0.36
Trim68Q8K243 Gm7063-201ENSMUST00000186840 981 ntBASIC17.27■□□□□ 0.36
Trim68Q8K243 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim68Q8K243 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim68Q8K243 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.27■□□□□ 0.36
Trim68Q8K243 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.27■□□□□ 0.36
Trim68Q8K243 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim68Q8K243 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim68Q8K243 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim68Q8K243 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trim68Q8K243 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim68Q8K243 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trim68Q8K243 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim68Q8K243 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim68Q8K243 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim68Q8K243 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim68Q8K243 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Gm13216-201ENSMUST00000117145 591 ntBASIC17.26■□□□□ 0.35
Trim68Q8K243 Gm7230-201ENSMUST00000173026 815 ntBASIC17.26■□□□□ 0.35
Trim68Q8K243 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.26■□□□□ 0.35
Trim68Q8K243 Gm2756-201ENSMUST00000195851 400 ntBASIC17.26■□□□□ 0.35
Trim68Q8K243 Gm7506-201ENSMUST00000207758 815 ntBASIC17.26■□□□□ 0.35
Trim68Q8K243 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.26■□□□□ 0.35
Trim68Q8K243 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim68Q8K243 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.25■□□□□ 0.35
Trim68Q8K243 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim68Q8K243 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim68Q8K243 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim68Q8K243 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim68Q8K243 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim68Q8K243 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim68Q8K243 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim68Q8K243 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim68Q8K243 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim68Q8K243 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim68Q8K243 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim68Q8K243 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim68Q8K243 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim68Q8K243 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim68Q8K243 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim68Q8K243 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim68Q8K243 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim68Q8K243 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms