Protein–RNA interactions for Protein: Q8CJ61

Cmtm4, CKLF-like MARVEL transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtm4Q8CJ61 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Trmt13-210ENSMUST00000198454 880 ntBASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cmtm4Q8CJ61 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Gm18666-201ENSMUST00000190039 958 ntBASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Gm37025-201ENSMUST00000195159 829 ntBASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cmtm4Q8CJ61 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Gm11249-201ENSMUST00000117071 859 ntBASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Gm27275-201ENSMUST00000184318 272 ntBASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cmtm4Q8CJ61 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cmtm4Q8CJ61 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cmtm4Q8CJ61 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cmtm4Q8CJ61 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cmtm4Q8CJ61 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms