Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Suds3Q8BR65 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Gm11950-201ENSMUST00000121615 838 ntBASIC16.4■□□□□ 0.22
Suds3Q8BR65 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Suds3Q8BR65 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.4■□□□□ 0.22
Suds3Q8BR65 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Suds3Q8BR65 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Suds3Q8BR65 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Suds3Q8BR65 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.39■□□□□ 0.21
Suds3Q8BR65 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Suds3Q8BR65 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Suds3Q8BR65 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.37■□□□□ 0.21
Suds3Q8BR65 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Suds3Q8BR65 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms