Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Gm12428-201ENSMUST00000119844 727 ntBASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Gm16198-201ENSMUST00000118766 670 ntBASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col16a1Q8BLX7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Gm9385-201ENSMUST00000117563 472 ntBASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Gm5626-201ENSMUST00000222151 1058 ntBASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col16a1Q8BLX7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Gm12008-201ENSMUST00000117791 755 ntBASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col16a1Q8BLX7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 CT025535.1-201ENSMUST00000227172 491 ntBASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col16a1Q8BLX7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.72■□□□□ 0.91
Col16a1Q8BLX7 Gm43438-201ENSMUST00000198133 379 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms