Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdhr3Q8BL00 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Gm37055-201ENSMUST00000191866 133 ntBASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdhr3Q8BL00 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms