Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Gm25016-201ENSMUST00000158399 131 ntBASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Gm28033-201ENSMUST00000184224 96 ntBASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Gm18025-201ENSMUST00000221733 862 ntBASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Srrm3Q80WV7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Phf7-203ENSMUST00000226565 1971 ntBASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.61■□□□□ 0.25
Srrm3Q80WV7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Srrm3Q80WV7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Gm6443-201ENSMUST00000203599 874 ntBASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm3Q80WV7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms