Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prdm4Q80V63 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Gm17661-201ENSMUST00000170317 270 ntBASIC16.61■□□□□ 0.25
Prdm4Q80V63 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prdm4Q80V63 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.6■□□□□ 0.25
Prdm4Q80V63 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prdm4Q80V63 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prdm4Q80V63 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Prdm4Q80V63 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prdm4Q80V63 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.58■□□□□ 0.24
Prdm4Q80V63 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms