Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Gm5264-201ENSMUST00000190584 848 ntBASIC18.75■□□□□ 0.59
Ube3cQ80U95 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.75■□□□□ 0.59
Ube3cQ80U95 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3cQ80U95 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3cQ80U95 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3cQ80U95 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.74■□□□□ 0.59
Ube3cQ80U95 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3cQ80U95 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3cQ80U95 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.74■□□□□ 0.59
Ube3cQ80U95 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3cQ80U95 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3cQ80U95 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.74■□□□□ 0.59
Ube3cQ80U95 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.74■□□□□ 0.59
Ube3cQ80U95 Gm15467-201ENSMUST00000120582 445 ntBASIC18.74■□□□□ 0.59
Ube3cQ80U95 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3cQ80U95 Gm9727-201ENSMUST00000161387 555 ntBASIC18.74■□□□□ 0.59
Ube3cQ80U95 Gm37153-201ENSMUST00000193637 231 ntBASIC18.74■□□□□ 0.59
Ube3cQ80U95 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3cQ80U95 Gm45167-201ENSMUST00000208007 322 ntBASIC18.74■□□□□ 0.59
Ube3cQ80U95 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3cQ80U95 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3cQ80U95 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Gm4899-201ENSMUST00000178708 719 ntBASIC18.73■□□□□ 0.59
Ube3cQ80U95 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.73■□□□□ 0.59
Ube3cQ80U95 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ube3cQ80U95 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.72■□□□□ 0.59
Ube3cQ80U95 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Gm12260-201ENSMUST00000122447 411 ntBASIC18.72■□□□□ 0.59
Ube3cQ80U95 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.72■□□□□ 0.59
Ube3cQ80U95 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ube3cQ80U95 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Gm11594-201ENSMUST00000122313 162 ntBASIC18.71■□□□□ 0.59
Ube3cQ80U95 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ube3cQ80U95 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms