Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Npc1l1Q6T3U4 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Npc1l1Q6T3U4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
Npc1l1Q6T3U4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Gm6550-201ENSMUST00000187574 993 ntBASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Npc1l1Q6T3U4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Npc1l1Q6T3U4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Npc1l1Q6T3U4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Npc1l1Q6T3U4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Npc1l1Q6T3U4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Npc1l1Q6T3U4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Gm4995-201ENSMUST00000117247 432 ntBASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Gm43575-201ENSMUST00000196420 516 ntBASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 AV026068-213ENSMUST00000223675 1171 ntBASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.01■□□□□ 0.63
Npc1l1Q6T3U4 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms