Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 App-207ENSMUST00000227737 2827 ntBASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Hdac4Q6NZM9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hdac4Q6NZM9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac4Q6NZM9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Gm44454-201ENSMUST00000198541 138 ntBASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hdac4Q6NZM9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms