Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Krt42Q6IFX2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Krt42Q6IFX2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Krt42Q6IFX2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Gm37179-201ENSMUST00000194862 823 ntBASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Gm44450-201ENSMUST00000199528 114 ntBASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Krt42Q6IFX2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Krt42Q6IFX2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms