Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Scn9aQ62205 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.63■□□□□ 0.57
Scn9aQ62205 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Scn9aQ62205 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Scn9aQ62205 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Scn9aQ62205 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn9aQ62205 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.63■□□□□ 0.57
Scn9aQ62205 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Scn9aQ62205 Gm27437-201ENSMUST00000183429 107 ntBASIC18.62■□□□□ 0.57
Scn9aQ62205 Gm10253-201ENSMUST00000194270 940 ntBASIC18.62■□□□□ 0.57
Scn9aQ62205 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.62■□□□□ 0.57
Scn9aQ62205 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 Gm25287-201ENSMUST00000103846 110 ntBASIC18.62■□□□□ 0.57
Scn9aQ62205 Gm22918-201ENSMUST00000103855 110 ntBASIC18.62■□□□□ 0.57
Scn9aQ62205 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.62■□□□□ 0.57
Scn9aQ62205 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.62■□□□□ 0.57
Scn9aQ62205 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn9aQ62205 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scn9aQ62205 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn9aQ62205 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Scn9aQ62205 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.61■□□□□ 0.57
Scn9aQ62205 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn9aQ62205 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.61■□□□□ 0.57
Scn9aQ62205 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.61■□□□□ 0.57
Scn9aQ62205 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.6■□□□□ 0.57
Scn9aQ62205 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.6■□□□□ 0.57
Scn9aQ62205 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn9aQ62205 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.6■□□□□ 0.57
Scn9aQ62205 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Gm16198-201ENSMUST00000118766 670 ntBASIC18.59■□□□□ 0.57
Scn9aQ62205 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn9aQ62205 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn9aQ62205 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms