Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Notch3Q61982 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Notch3Q61982 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Notch3Q61982 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Notch3Q61982 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Notch3Q61982 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Notch3Q61982 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.23□□□□□ -0.45
Notch3Q61982 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Notch3Q61982 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.23□□□□□ -0.45
Notch3Q61982 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.23□□□□□ -0.45
Notch3Q61982 Auts2-212ENSMUST00000178555 309 ntBASIC12.23□□□□□ -0.45
Notch3Q61982 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.23□□□□□ -0.45
Notch3Q61982 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Notch3Q61982 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Notch3Q61982 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Notch3Q61982 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.23□□□□□ -0.45
Notch3Q61982 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Notch3Q61982 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.22□□□□□ -0.45
Notch3Q61982 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Notch3Q61982 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Notch3Q61982 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Notch3Q61982 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.22□□□□□ -0.45
Notch3Q61982 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.22□□□□□ -0.45
Notch3Q61982 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.22□□□□□ -0.45
Notch3Q61982 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.22□□□□□ -0.45
Notch3Q61982 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.22□□□□□ -0.45
Notch3Q61982 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Notch3Q61982 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Notch3Q61982 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.22□□□□□ -0.45
Notch3Q61982 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Notch3Q61982 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Notch3Q61982 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Notch3Q61982 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Notch3Q61982 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Notch3Q61982 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms