Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Sdf4Q61112 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.17■□□□□ 0.18
Sdf4Q61112 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sdf4Q61112 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sdf4Q61112 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sdf4Q61112 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sdf4Q61112 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.16■□□□□ 0.18
Sdf4Q61112 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sdf4Q61112 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.16■□□□□ 0.18
Sdf4Q61112 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.16■□□□□ 0.18
Sdf4Q61112 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.16■□□□□ 0.18
Sdf4Q61112 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sdf4Q61112 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sdf4Q61112 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.16■□□□□ 0.18
Sdf4Q61112 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Sdf4Q61112 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sdf4Q61112 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.15■□□□□ 0.18
Sdf4Q61112 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sdf4Q61112 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sdf4Q61112 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sdf4Q61112 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Sdf4Q61112 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.14■□□□□ 0.17
Sdf4Q61112 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Gm44454-201ENSMUST00000198541 138 ntBASIC16.14■□□□□ 0.17
Sdf4Q61112 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Gm7367-201ENSMUST00000057611 492 ntBASIC16.14■□□□□ 0.17
Sdf4Q61112 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.14■□□□□ 0.17
Sdf4Q61112 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.14■□□□□ 0.17
Sdf4Q61112 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sdf4Q61112 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sdf4Q61112 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms